RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 ANKRD1Q15327 319 aa15.32■□□□□ 0.04
HLA-DMA-202ENST00000395303 GNPTABQ3T906 1256 aa15.32■□□□□ 0.04
HLA-DMA-202ENST00000395303 BRDTQ58F21 947 aaPredicted RBP15.32■□□□□ 0.04
HLA-DMA-202ENST00000395303 PHKBQ93100 1093 aa15.32■□□□□ 0.04
HLA-DMA-202ENST00000395303 LARP6Q9BRS8 491 aaKnown RBP15.32■□□□□ 0.04
HLA-DMA-202ENST00000395303 TPCN1Q9ULQ1 816 aa15.32■□□□□ 0.04
HLA-DMA-202ENST00000395303 GRIN2DO15399 1336 aa15.32■□□□□ 0.04
HLA-DMA-202ENST00000395303 SPDYE3A6NKU9 549 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 SPATA31C2B4DYI2 1134 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 PFKFB2O60825 505 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 MMP3P08254 477 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 CLTBP09497 229 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 AK2P54819 239 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 SP2Q02086 613 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 FAAP100Q0VG06 881 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 AP3B2Q13367 1082 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 ITGA7Q13683 1181 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 LAMC2Q13753 1193 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 CELF3Q5SZQ8 465 aaKnown RBP15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 MYSM1Q5VVJ2 828 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 FAM126BQ8IXS8 530 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 FAM177A1Q8N128 213 aaPredicted RBP15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 CCDC12Q8WUD4 166 aaPredicted RBP15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 AFG1LQ8WV93 481 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 MTG1Q9BT17 334 aaPredicted RBP15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 SLC26A6Q9BXS9 759 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 EHMT1Q9H9B1 1298 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 SH3GLB2Q9NR46 395 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 UBIAD1Q9Y5Z9 338 aa15.31■□□□□ 0.04
HLA-DMA-202ENST00000395303 KIAA0355O15063 1070 aa15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 FIBPO43427 364 aa15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 CD4P01730 458 aa15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 UBA1P22314 1058 aaKnown RBP15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 AKAP17AQ02040 695 aaKnown RBP15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 SSRP1Q08945 709 aaKnown RBP15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 SCRN1Q12765 414 aa15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 MCTP2Q6DN12 878 aa15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 SH3RF1Q7Z6J0 888 aa15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 DHX37Q8IY37 1157 aaKnown RBP15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 PPTC7Q8NI37 304 aa15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 VTI1AQ96AJ9 217 aa15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 GPRASP2Q96D09 838 aa15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 ZFP91Q96JP5 570 aaPredicted RBP15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 KIF2CQ99661 725 aa15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 SENP7Q9BQF6 1050 aa15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 ANO3Q9BYT9 981 aa15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 SLKQ9H2G2 1235 aaPredicted RBP15.3■□□□□ 0.04
HLA-DMA-202ENST00000395303 TRIM43BA6NCK2 446 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 DCDC2CA8MYV0 355 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 PQBP1O60828 265 aaKnown RBP15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 DEXIO95424 95 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 MYL3P08590 195 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 SREBF1P36956 1147 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 RBM25P49756 843 aaKnown RBP15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 NEK4P51957 841 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 STK3Q13188 491 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 CPLX2Q6PUV4 134 aaKnown RBP15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 TRIM22Q8IYM9 498 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 CCDC148Q8NFR7 591 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 CRYGNQ8WXF5 182 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 TRIM43Q96BQ3 446 aaPredicted RBP15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 C6orf50Q9HD87 102 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 RTEL1Q9NZ71 1219 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 TBX21Q9UL17 535 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 TANC1Q9C0D5 1861 aa15.29■□□□□ 0.04
HLA-DMA-202ENST00000395303 SCN5AQ14524 2016 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 STK36Q9NRP7 1315 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 CPLX1O14810 134 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 ADAMTS3O15072 1205 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 MAFGO15525 162 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 GGPS1O95749 300 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 ITGB5P18084 799 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 GNA11P29992 359 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 PSMC6P62333 389 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 NEDD9Q14511 834 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 DGKDQ16760 1214 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 NFRKBQ6P4R8 1299 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 METTL7BQ6UX53 244 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 NLRX1Q86UT6 975 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 KAT2BQ92831 832 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 CDHR1Q96JP9 859 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 JADE2Q9NQC1 790 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 TMEM260Q9NX78 707 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 PRKAG2Q9UGJ0 569 aa15.28■□□□□ 0.04
HLA-DMA-202ENST00000395303 TLR3O15455 904 aaKnown RBP15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 PPFIA3O75145 1194 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 PPFIA4O75335 1185 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 CDKL5O76039 1030 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 LARGE1O95461 756 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 CYP3A4P08684 503 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 ITGB8P26012 769 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 PTPN11Q06124 597 aaPredicted RBP15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 ME3Q16798 604 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 NBPF20Q3BBV1 942 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 HSDL1Q3SXM5 330 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 FAM109BQ6ICB4 259 aaPredicted RBP15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 SESTD1Q86VW0 696 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 TET1Q8NFU7 2136 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 PGBD1Q96JS3 809 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 GUCD1Q96NT3 240 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms