RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 STK31Q9BXU1 1019 aa10.55□□□□□ -0.72
PFDN6-205ENST00000395134 ZC3H12CQ9C0D7 883 aaKnown RBP10.55□□□□□ -0.72
PFDN6-205ENST00000395134 GREM2Q9H772 168 aa10.55□□□□□ -0.72
PFDN6-205ENST00000395134 CASS4Q9NQ75 786 aa10.55□□□□□ -0.72
PFDN6-205ENST00000395134 TLR7Q9NYK1 1049 aaKnown RBP10.55□□□□□ -0.72
PFDN6-205ENST00000395134 ZFATQ9P243 1243 aa10.55□□□□□ -0.72
PFDN6-205ENST00000395134 PGAP2Q9UHJ9 254 aa10.55□□□□□ -0.72
PFDN6-205ENST00000395134 ECM29Q5VYK3 1845 aa10.55□□□□□ -0.72
PFDN6-205ENST00000395134 CEP290O15078 2479 aa10.55□□□□□ -0.72
PFDN6-205ENST00000395134 TRBV23-1A0A0A0MS06 115 aa10.54□□□□□ -0.72
PFDN6-205ENST00000395134 AGRPO00253 132 aa10.54□□□□□ -0.72
PFDN6-205ENST00000395134 RAPGEF1Q13905 1077 aa10.54□□□□□ -0.72
PFDN6-205ENST00000395134 SAMD5Q5TGI4 173 aa10.54□□□□□ -0.72
PFDN6-205ENST00000395134 LIAT1Q6ZQX7 453 aa10.54□□□□□ -0.72
PFDN6-205ENST00000395134 UBE3BQ7Z3V4 1068 aa10.54□□□□□ -0.72
PFDN6-205ENST00000395134 DPF2Q92785 391 aa10.54□□□□□ -0.72
PFDN6-205ENST00000395134 E2F7Q96AV8 911 aa10.54□□□□□ -0.72
PFDN6-205ENST00000395134 DCPSQ96C86 337 aaKnown RBP10.54□□□□□ -0.72
PFDN6-205ENST00000395134 OTUD5Q96G74 571 aa10.54□□□□□ -0.72
PFDN6-205ENST00000395134 POLMQ9NP87 494 aaPredicted RBP10.54□□□□□ -0.72
PFDN6-205ENST00000395134 PCDHB10Q9UN67 800 aa10.54□□□□□ -0.72
PFDN6-205ENST00000395134 KIAA0100Q14667 2235 aaKnown RBP10.54□□□□□ -0.72
PFDN6-205ENST00000395134 XDHP47989 1333 aa10.54□□□□□ -0.72
PFDN6-205ENST00000395134 PAPPA2Q9BXP8 1791 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 BRINP1O60477 761 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 F2P00734 622 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 ACRP10323 421 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 RPS12P25398 132 aaKnown RBP10.53□□□□□ -0.72
PFDN6-205ENST00000395134 ARNTP27540 789 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 PURAQ00577 322 aaKnown RBP10.53□□□□□ -0.72
PFDN6-205ENST00000395134 PTPN11Q06124 597 aaPredicted RBP10.53□□□□□ -0.72
PFDN6-205ENST00000395134 STAT4Q14765 748 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 DHCR24Q15392 516 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 TWISTNBQ3B726 338 aaPredicted RBP10.53□□□□□ -0.72
PFDN6-205ENST00000395134 SCARA3Q6AZY7 606 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 SULF2Q8IWU5 870 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 SCUBE1Q8IWY4 988 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 PNMA5Q96PV4 448 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 CBX8Q9HC52 389 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 GBA2Q9HCG7 927 aaPredicted RBP10.53□□□□□ -0.72
PFDN6-205ENST00000395134 DACH1Q9UI36 760 aa10.53□□□□□ -0.72
PFDN6-205ENST00000395134 TRAV20A0A0B4J274 112 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 A0A1W2PQU0 124 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 NEURL1BA8MQ27 555 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 HOXD8P13378 290 aaPredicted RBP10.52□□□□□ -0.73
PFDN6-205ENST00000395134 TIMP2P16035 220 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 ZSCAN20P17040 1043 aaPredicted RBP10.52□□□□□ -0.73
PFDN6-205ENST00000395134 POU3F2P20265 443 aaPredicted RBP10.52□□□□□ -0.73
PFDN6-205ENST00000395134 KLRK1P26718 216 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 NEXNQ0ZGT2 675 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 INO80DQ53TQ3 878 aaPredicted RBP10.52□□□□□ -0.73
PFDN6-205ENST00000395134 ANGEL2Q5VTE6 544 aaKnown RBP10.52□□□□□ -0.73
PFDN6-205ENST00000395134 PRICKLE2Q7Z3G6 844 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 SPATS2Q86XZ4 545 aaKnown RBP10.52□□□□□ -0.73
PFDN6-205ENST00000395134 MEIOBQ8N635 442 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 STK35Q8TDR2 534 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 CDCA5Q96FF9 252 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 CDC5LQ99459 802 aaKnown RBP10.52□□□□□ -0.73
PFDN6-205ENST00000395134 EMILIN2Q9BXX0 1053 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 TRIM8Q9BZR9 551 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 CRISPLD1Q9H336 500 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 TIMMDC1Q9NPL8 285 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 ARHGEF4Q9NR80 690 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 TAGLN3Q9UI15 199 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 ANAPC4Q9UJX5 808 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 FBXO9Q9UK97 447 aaPredicted RBP10.52□□□□□ -0.73
PFDN6-205ENST00000395134 FANCIQ9NVI1 1328 aa10.52□□□□□ -0.73
PFDN6-205ENST00000395134 MYH13Q9UKX3 1938 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 PDE2AO00408 941 aaPredicted RBP10.51□□□□□ -0.73
PFDN6-205ENST00000395134 SPINT1O43278 529 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 ABLIM3O94929 683 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 HTR3BO95264 441 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 IFIT2P09913 472 aaKnown RBP10.51□□□□□ -0.73
PFDN6-205ENST00000395134 TRIM27P14373 513 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 BDNFP23560 247 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 MAP2K2P36507 400 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 PLAURQ03405 335 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 SCARF1Q14162 830 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 TMEM95Q3KNT9 176 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 GRAMD1BQ3KR37 738 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 PRAMEF18Q5VWM3 479 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 SPICE1Q8N0Z3 855 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 TTLL11Q8NHH1 800 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 JPH3Q8WXH2 748 aaPredicted RBP10.51□□□□□ -0.73
PFDN6-205ENST00000395134 SLC7A3Q8WY07 619 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 KLHL6Q8WZ60 621 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 TRERF1Q96PN7 1200 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.51□□□□□ -0.73
PFDN6-205ENST00000395134 RHOBTB2Q9BYZ6 727 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 MUC3BQ9H195 1237 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 OBP2AQ9NY56 170 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 TRHDEQ9UKU6 1024 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 BRCA2P51587 3418 aa10.51□□□□□ -0.73
PFDN6-205ENST00000395134 DNAJC8O75937 253 aaPredicted RBP10.5□□□□□ -0.73
PFDN6-205ENST00000395134 SASH1O94885 1247 aa10.5□□□□□ -0.73
PFDN6-205ENST00000395134 NME1P15531 152 aaKnown RBP10.5□□□□□ -0.73
PFDN6-205ENST00000395134 SLC7A5Q01650 507 aa10.5□□□□□ -0.73
PFDN6-205ENST00000395134 NOGQ13253 232 aa10.5□□□□□ -0.73
PFDN6-205ENST00000395134 PCBP1Q15365 356 aaKnown RBP eCLIP10.5□□□□□ -0.73
PFDN6-205ENST00000395134 WDR78Q5VTH9 848 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms