RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	SYCP1	Q15431	976 aa		10.31	□□□□□ -0.76
MITF-205	ENST00000394348	CEP135	Q66GS9	1140 aa		10.31	□□□□□ -0.76
MITF-205	ENST00000394348	CENPP	Q6IPU0	288 aa		10.31	□□□□□ -0.76
MITF-205	ENST00000394348	USP17L6P	Q6QN14	398 aa		10.31	□□□□□ -0.76
MITF-205	ENST00000394348	PPFIBP1	Q86W92	1011 aa		10.31	□□□□□ -0.76
MITF-205	ENST00000394348	GUF1	Q8N442	669 aa	Known RBP	10.31	□□□□□ -0.76
MITF-205	ENST00000394348	LPAR1	Q92633	364 aa		10.31	□□□□□ -0.76
MITF-205	ENST00000394348	HOOK2	Q96ED9	719 aa		10.31	□□□□□ -0.76
MITF-205	ENST00000394348	PPP1R13B	Q96KQ4	1090 aa		10.31	□□□□□ -0.76
MITF-205	ENST00000394348	C16orf45	Q96MC5	204 aa	Predicted RBP	10.31	□□□□□ -0.76
MITF-205	ENST00000394348	NUP88	Q99567	741 aa	Predicted RBP	10.31	□□□□□ -0.76
MITF-205	ENST00000394348	BAG1	Q99933	345 aa	Predicted RBP	10.31	□□□□□ -0.76
MITF-205	ENST00000394348	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.31	□□□□□ -0.76
MITF-205	ENST00000394348	MRPL11	Q9Y3B7	192 aa	Known RBP	10.31	□□□□□ -0.76
MITF-205	ENST00000394348	PITPNM2	Q9BZ72	1349 aa		10.31	□□□□□ -0.76
MITF-205	ENST00000394348	POTEM	A6NI47	508 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	MYMK	A6NI61	221 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	NFKBIE	O00221	500 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	OPLAH	O14841	1288 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	N4BP3	O15049	544 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	WDR46	O15213	610 aa	Known RBP	10.3	□□□□□ -0.76
MITF-205	ENST00000394348	RAD21	O60216	631 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	MFAP3L	O75121	409 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	KIF20A	O95235	890 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	FDX1	P10109	184 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	LRRC63	Q05C16	580 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	RETREG2	Q8NC44	543 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	ACER1	Q8TDN7	264 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	LENG9	Q96B70	501 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	TRIM47	Q96LD4	638 aa		10.3	□□□□□ -0.76
MITF-205	ENST00000394348	RBBP6	Q7Z6E9	1792 aa	Known RBP	10.29	□□□□□ -0.76
MITF-205	ENST00000394348	FRMD3	A2A2Y4	597 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	PHF20L1	A8MW92	1017 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.29	□□□□□ -0.76
MITF-205	ENST00000394348	FZD9	O00144	591 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	TEX33	O43247	280 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	CTIF	O43310	598 aa	Known RBP	10.29	□□□□□ -0.76
MITF-205	ENST00000394348	CTNND1	O60716	968 aa	Known RBP	10.29	□□□□□ -0.76
MITF-205	ENST00000394348	POLR2M	P0CAP2	368 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	RPA1	P27694	616 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	CCT6A	P40227	531 aa	Known RBP	10.29	□□□□□ -0.76
MITF-205	ENST00000394348	ECE1	P42892	770 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	DNM2	P50570	870 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	SET	Q01105	290 aa	Predicted RBP	10.29	□□□□□ -0.76
MITF-205	ENST00000394348	SPIRE1	Q08AE8	756 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	MCM6	Q14566	821 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	FAM83B	Q5T0W9	1011 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	MTERF4	Q7Z6M4	381 aa	Known RBP	10.29	□□□□□ -0.76
MITF-205	ENST00000394348	IRF2BP1	Q8IU81	584 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	KIAA0895	Q8NCT3	520 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	KIF18A	Q8NI77	898 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	TEPSIN	Q96N21	525 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	PLIN2	Q99541	437 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	DUSP9	Q99956	384 aa	Known RBP	10.29	□□□□□ -0.76
MITF-205	ENST00000394348	POLR3C	Q9BUI4	534 aa	Predicted RBP	10.29	□□□□□ -0.76
MITF-205	ENST00000394348	NUP58	Q9BVL2	599 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	TMEM39B	Q9GZU3	492 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	KIAA1683	Q9H0B3	1180 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	MAP3K20	Q9NYL2	800 aa	Known RBP	10.29	□□□□□ -0.76
MITF-205	ENST00000394348	DOCK1	Q14185	1865 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	PHLPP2	Q6ZVD8	1323 aa		10.29	□□□□□ -0.76
MITF-205	ENST00000394348	USP27X	A6NNY8	438 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	ZBTB7A	O95365	584 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	PTGER2	P43116	358 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	STK4	Q13043	487 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	RASA3	Q14644	834 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	USH1G	Q495M9	461 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	HSP90AA4P	Q58FG1	418 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	FIGN	Q5HY92	759 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	KIAA1755	Q5JYT7	1200 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	DCAF15	Q66K64	600 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	NIPA1	Q7RTP0	329 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	TMTC1	Q8IUR5	882 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	CCDC65	Q8IXS2	484 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	CSGALNACT2	Q8N6G5	542 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	ZNF507	Q8TCN5	953 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	DDX12P	Q92771	950 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	DNAJC19	Q96DA6	116 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	MAP7D2	Q96T17	732 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	P2RX7	Q99572	595 aa	Known RBP	10.28	□□□□□ -0.76
MITF-205	ENST00000394348	TSG101	Q99816	390 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	MAF1	Q9H063	256 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	LOXHD1	Q8IVV2	1947 aa		10.28	□□□□□ -0.76
MITF-205	ENST00000394348	IGLV3-22	A0A075B6J6	115 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	GYPC	P04921	128 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	ICAM1	P05362	532 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	PLA2G4B	P0C869	781 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	PRKCSH	P14314	528 aa	Predicted RBP	10.27	□□□□□ -0.77
MITF-205	ENST00000394348	HSD17B4	P51659	736 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	PMS1	P54277	932 aa	Known RBP	10.27	□□□□□ -0.77
MITF-205	ENST00000394348	USP14	P54578	494 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	ETF1	P62495	437 aa	Known RBP	10.27	□□□□□ -0.77
MITF-205	ENST00000394348	COASY	Q13057	564 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	KIF4B	Q2VIQ3	1234 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	NBPF9	Q3BBW0	867 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	PRR16	Q569H4	304 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	ARHGAP27	Q6ZUM4	889 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	KRT26	Q7Z3Y9	468 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	MCF2L2	Q86YR7	1114 aa		10.27	□□□□□ -0.77
MITF-205	ENST00000394348	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms