RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 PPP2R3BQ9Y5P8 575 aa20.05■□□□□ 0.8
CLDND1-204ENST00000394185 PHIPQ8WWQ0 1821 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 NPHP3-ACAD11A0A0J9YXS1 232 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 SKILP12757 684 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 IDEP14735 1019 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 CACNB1Q02641 598 aaPredicted RBP20.04■□□□□ 0.8
CLDND1-204ENST00000394185 CYP4A11Q02928 519 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 PURBQ96QR8 312 aaKnown RBP20.04■□□□□ 0.8
CLDND1-204ENST00000394185 SPTLC3Q9NUV7 552 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 KDM3AQ9Y4C1 1321 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 ARP10275 920 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 GSDMDP57764 484 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 RAD51AP2Q09MP3 1159 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 CEP55Q53EZ4 464 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.04■□□□□ 0.8
CLDND1-204ENST00000394185 UNC13DQ70J99 1090 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 IRF2BP1Q8IU81 584 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 CREBRFQ8IUR6 639 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 DNAJC19Q96DA6 116 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 NT5C3AQ9H0P0 336 aa20.04■□□□□ 0.8
CLDND1-204ENST00000394185 CHMP2AO43633 222 aa20.03■□□□□ 0.8
CLDND1-204ENST00000394185 PLA2G4BP0C869 781 aa20.03■□□□□ 0.8
CLDND1-204ENST00000394185 VGLL4Q14135 290 aa20.03■□□□□ 0.8
CLDND1-204ENST00000394185 KRT31Q15323 416 aa20.03■□□□□ 0.8
CLDND1-204ENST00000394185 SUPT20HL1Q3ZLR7 823 aa20.03■□□□□ 0.8
CLDND1-204ENST00000394185 RGL1Q9NZL6 768 aa20.03■□□□□ 0.8
CLDND1-204ENST00000394185 ADD3Q9UEY8 706 aaKnown RBP20.03■□□□□ 0.8
CLDND1-204ENST00000394185 OFD1O75665 1012 aa20.02■□□□□ 0.8
CLDND1-204ENST00000394185 TTI2Q6NXR4 508 aa20.02■□□□□ 0.8
CLDND1-204ENST00000394185 AFG3L2Q9Y4W6 797 aa20.02■□□□□ 0.8
CLDND1-204ENST00000394185 PARP14Q460N5 1801 aa20.02■□□□□ 0.8
CLDND1-204ENST00000394185 PITPNM2Q9BZ72 1349 aa20.02■□□□□ 0.8
CLDND1-204ENST00000394185 PSMA7O14818 248 aa20.02■□□□□ 0.8
CLDND1-204ENST00000394185 ITGB5P18084 799 aa20.02■□□□□ 0.8
CLDND1-204ENST00000394185 RPS6P62753 249 aaKnown RBP20.02■□□□□ 0.8
CLDND1-204ENST00000394185 OTOP1Q7RTM1 612 aa20.02■□□□□ 0.8
CLDND1-204ENST00000394185 SNCAIPQ9Y6H5 919 aa20.02■□□□□ 0.8
CLDND1-204ENST00000394185 RLFQ13129 1914 aa20.02■□□□□ 0.79
CLDND1-204ENST00000394185 PSMD10O75832 226 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 SFPQP23246 707 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLDND1-204ENST00000394185 TCP11X2Q5H9J9 407 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 LRCH2Q5VUJ6 765 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 HAUS3Q68CZ6 603 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 ANKRD40Q6AI12 368 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 CNNM4Q6P4Q7 775 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 TEX2Q8IWB9 1127 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 SYTL5Q8TDW5 730 aaPredicted RBP20.01■□□□□ 0.79
CLDND1-204ENST00000394185 DUSP9Q99956 384 aaKnown RBP20.01■□□□□ 0.79
CLDND1-204ENST00000394185 FGFBP2Q9BYJ0 223 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 KCNJ18B7U540 433 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 ZBED4O75132 1171 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 RPA1P27694 616 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 SLC12A3P55017 1021 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 EHHADHQ08426 723 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 STIM1Q13586 685 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 KCNJ12Q14500 433 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 LRRC41Q15345 812 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 ARSHQ5FYA8 562 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 NOL9Q5SY16 702 aaKnown RBP20.01■□□□□ 0.79
CLDND1-204ENST00000394185 GPBP1Q86WP2 473 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 SLC5A5Q92911 643 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 CCDC47Q96A33 483 aaKnown RBP20.01■□□□□ 0.79
CLDND1-204ENST00000394185 DCPSQ96C86 337 aaKnown RBP20.01■□□□□ 0.79
CLDND1-204ENST00000394185 TRIM47Q96LD4 638 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 C12orf42Q96LP6 360 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 TRERF1Q96PN7 1200 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 EIF2AK1Q9BQI3 630 aaKnown RBP20.01■□□□□ 0.79
CLDND1-204ENST00000394185 VPS16Q9H269 839 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 TAB2Q9NYJ8 693 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 PKD2L1Q9P0L9 805 aa20.01■□□□□ 0.79
CLDND1-204ENST00000394185 RPTORQ8N122 1335 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 PVALEFA0A1B0GWK0 134 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 USP27XA6NNY8 438 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 CYP11B2P19099 503 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 TBX2Q13207 712 aaPredicted RBP20■□□□□ 0.79
CLDND1-204ENST00000394185 PABPC4Q13310 644 aaKnown RBP eCLIP20■□□□□ 0.794e-9■□□□□ 10.6
CLDND1-204ENST00000394185 SPECC1LQ69YQ0 1117 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 SULF1Q8IWU6 871 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 REPS2Q8NFH8 660 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 TAAR1Q96RJ0 339 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 SRRTQ9BXP5 876 aaKnown RBP20■□□□□ 0.79
CLDND1-204ENST00000394185 SEMA6BQ9H3T3 888 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 CTDP1Q9Y5B0 961 aaPredicted RBP20■□□□□ 0.79
CLDND1-204ENST00000394185 NKRFO15226 690 aaKnown RBP eCLIP20■□□□□ 0.79
CLDND1-204ENST00000394185 COASYQ13057 564 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 SEMA3FQ13275 785 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 CCDC150Q8NCX0 1101 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 P2RX5Q93086 422 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 DHTKD1Q96HY7 919 aaPredicted RBP20■□□□□ 0.79
CLDND1-204ENST00000394185 ZNF577Q9BSK1 485 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 WDR11Q9BZH6 1224 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 EHMT1Q9H9B1 1298 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 TBC1D7Q9P0N9 293 aa20■□□□□ 0.79
CLDND1-204ENST00000394185 LIMA1Q9UHB6 759 aaKnown RBP20■□□□□ 0.79
CLDND1-204ENST00000394185 PEX10O60683 326 aa19.99■□□□□ 0.79
CLDND1-204ENST00000394185 EIF2AK2P19525 551 aaKnown RBP19.99■□□□□ 0.79
CLDND1-204ENST00000394185 MRPS9P82933 396 aaKnown RBP19.99■□□□□ 0.79
CLDND1-204ENST00000394185 CTTNQ14247 550 aaKnown RBP19.99■□□□□ 0.79
CLDND1-204ENST00000394185 CEP135Q66GS9 1140 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms