RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 C16orf86Q6ZW13 317 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 KIAA0825Q8IV33 1275 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 ZSCAN29Q8IWY8 852 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 ZC3H12CQ9C0D7 883 aaKnown RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 C6orf50Q9HD87 102 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 EPN1Q9Y6I3 576 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 CCDC88AQ3V6T2 1871 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 OPLAHO14841 1288 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 GCFC2P16383 781 aaKnown RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 MCM3P25205 808 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 CCNHP51946 323 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 PPP4CP60510 307 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 LRRC41Q15345 812 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 PREPLQ4J6C6 727 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 REXO1Q8N1G1 1221 aaKnown RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 HAUS2Q9NVX0 235 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 TBC1D7Q9P0N9 293 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 RWDD2AQ9UIY3 292 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 RREB1Q92766 1687 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 E7EVH7 732 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 PPEF1O14829 653 aaPredicted RBP11□□□□□ -0.65
PSEN1-204ENST00000394164 SLC37A4O43826 429 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 FSBPO95073 299 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 NDUFA10O95299 355 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 OR52Z1P0C646 297 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
PSEN1-204ENST00000394164 NNTQ13423 1086 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 IRF2BP1Q8IU81 584 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 CSGALNACT2Q8N6G5 542 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 NEDD1Q8NHV4 660 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 ZNF526Q8TF50 670 aaPredicted RBP11□□□□□ -0.65
PSEN1-204ENST00000394164 CTAGE1Q96RT6 745 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 ZNF287Q9HBT7 754 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 FAM184BQ9ULE4 1060 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 WDR3Q9UNX4 943 aaKnown RBP eCLIP11□□□□□ -0.65
PSEN1-204ENST00000394164 PDS5AQ29RF7 1337 aaKnown RBP11□□□□□ -0.65
PSEN1-204ENST00000394164 M0R2N6 131 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 GBP2P32456 591 aaPredicted RBP11□□□□□ -0.65
PSEN1-204ENST00000394164 NAP1L1P55209 391 aaKnown RBP11□□□□□ -0.65
PSEN1-204ENST00000394164 CYP27A1Q02318 531 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 SPRED3Q2MJR0 410 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 ARL6IP4Q66PJ3 421 aaKnown RBP11□□□□□ -0.65
PSEN1-204ENST00000394164 NEK8Q86SG6 692 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 ZNF473Q8WTR7 871 aaKnown RBP11□□□□□ -0.65
PSEN1-204ENST00000394164 NUDT12Q9BQG2 462 aa11□□□□□ -0.65
PSEN1-204ENST00000394164 QTRT2Q9H974 415 aaKnown RBP11□□□□□ -0.65
PSEN1-204ENST00000394164 TTC26A0AVF1 554 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 ESYT3A0FGR9 886 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 GOLGA8KD6RF30 607 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 HSF2BPO75031 334 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 LSP1P33241 339 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 HSPA1LP34931 641 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 GLIS3Q8NEA6 775 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 SH3GL2Q99962 352 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 LACRTQ9GZZ8 138 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 EXOC1Q9NV70 894 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 RCCD1A6NED2 376 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 EIF4E1BA6NMX2 242 aaKnown RBP10.99□□□□□ -0.65
PSEN1-204ENST00000394164 C21orf2O43822 256 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 GUCY2FP51841 1108 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 SARNPP82979 210 aaKnown RBP10.99□□□□□ -0.65
PSEN1-204ENST00000394164 ANKRD40Q6AI12 368 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 TMED8Q6PL24 325 aaPredicted RBP10.99□□□□□ -0.65
PSEN1-204ENST00000394164 ADSSL1Q8N142 457 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 AENQ8WTP8 325 aaKnown RBP10.99□□□□□ -0.65
PSEN1-204ENST00000394164 IFT81Q8WYA0 676 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 ZIM3Q96PE6 472 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 TRIM6Q9C030 488 aaPredicted RBP10.99□□□□□ -0.65
PSEN1-204ENST00000394164 ZMYND12Q9H0C1 365 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 KANSL2Q9H9L4 492 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 AGPAT5Q9NUQ2 364 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 RMND1Q9NWS8 449 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 MAGEC2Q9UBF1 373 aaPredicted RBP10.99□□□□□ -0.65
PSEN1-204ENST00000394164 SNED1Q8TER0 1413 aa10.99□□□□□ -0.65
PSEN1-204ENST00000394164 GOLGA6L7A0A1B0GV03 622 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 FAM170AA1A519 330 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 EME2A4GXA9 379 aaPredicted RBP10.98□□□□□ -0.65
PSEN1-204ENST00000394164 USP17L10C9JJH3 530 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 KLRC4O43908 158 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 OPA1O60313 960 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 IL1R1P14778 569 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 PBX1P40424 430 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 MTIF2P46199 727 aaKnown RBP10.98□□□□□ -0.65
PSEN1-204ENST00000394164 HERVK_113P62684 666 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 SNCBQ16143 134 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 CDK5RAP3Q96JB5 506 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 ZHX3Q9H4I2 956 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 SH3GLB2Q9NR46 395 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 LRWD1Q9UFC0 647 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 USP17L15C9J2P7 530 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 USP17L13C9JLJ4 530 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 USP17L11C9JVI0 530 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 USP17L18D6R9N7 530 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 USP17L22D6RA61 530 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 USP17L17D6RBQ6 530 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 USP17L19D6RCP7 530 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 USP17L20D6RJB6 530 aa10.98□□□□□ -0.65
PSEN1-204ENST00000394164 TULP1O00294 542 aaPredicted RBP10.98□□□□□ -0.65
PSEN1-204ENST00000394164 POLRMTO00411 1230 aaKnown RBP10.98□□□□□ -0.65
PSEN1-204ENST00000394164 PSMA7O14818 248 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms