RNA–Protein interactions for RNA: ENST00000393230.6

NRF1-204, Transcript of nuclear respiratory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NRF1, Length 3,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1-204ENST00000393230 NLRC4Q9NPP4 1024 aa12.09□□□□□ -0.47
NRF1-204ENST00000393230 ZNF185O15231 689 aa12.09□□□□□ -0.47
NRF1-204ENST00000393230 TDP2O95551 362 aa12.09□□□□□ -0.47
NRF1-204ENST00000393230 RNASE9P60153 205 aaKnown RBP12.09□□□□□ -0.47
NRF1-204ENST00000393230 SEPT2Q15019 361 aa12.09□□□□□ -0.47
NRF1-204ENST00000393230 SPA17Q15506 151 aa12.09□□□□□ -0.47
NRF1-204ENST00000393230 TTBK2Q6IQ55 1244 aa12.09□□□□□ -0.47
NRF1-204ENST00000393230 KBTBD4Q9NVX7 518 aa12.09□□□□□ -0.47
NRF1-204ENST00000393230 LIMA1Q9UHB6 759 aaKnown RBP12.09□□□□□ -0.47
NRF1-204ENST00000393230 USP17L10C9JJH3 530 aa12.08□□□□□ -0.47
NRF1-204ENST00000393230 ATP1A1P05023 1023 aaKnown RBP12.08□□□□□ -0.47
NRF1-204ENST00000393230 PLEKP08567 350 aaPredicted RBP12.08□□□□□ -0.47
NRF1-204ENST00000393230 PPP1R2P41236 205 aa12.08□□□□□ -0.47
NRF1-204ENST00000393230 DLGAP5Q15398 846 aa12.08□□□□□ -0.47
NRF1-204ENST00000393230 PPP4R3AQ6IN85 833 aa12.08□□□□□ -0.47
NRF1-204ENST00000393230 CACNA2D4Q7Z3S7 1137 aa12.08□□□□□ -0.47
NRF1-204ENST00000393230 SNX29Q8TEQ0 813 aa12.08□□□□□ -0.47
NRF1-204ENST00000393230 CSRNP1Q96S65 589 aa12.08□□□□□ -0.47
NRF1-204ENST00000393230 PSTPIP2Q9H939 334 aa12.08□□□□□ -0.47
NRF1-204ENST00000393230 ZRANB2O95218 330 aaKnown RBP eCLIP12.08□□□□□ -0.48
NRF1-204ENST00000393230 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.48
NRF1-204ENST00000393230 GMCL1Q96IK5 515 aa12.08□□□□□ -0.48
NRF1-204ENST00000393230 PRMT6Q96LA8 375 aaPredicted RBP12.08□□□□□ -0.48
NRF1-204ENST00000393230 SPDYE2BA6NHP3 402 aa12.08□□□□□ -0.48
NRF1-204ENST00000393230 VIL1P09327 827 aaKnown RBP12.08□□□□□ -0.48
NRF1-204ENST00000393230 SPDYE6P0CI01 402 aa12.08□□□□□ -0.48
NRF1-204ENST00000393230 TRAF1Q13077 416 aa12.08□□□□□ -0.48
NRF1-204ENST00000393230 IRF2BP1Q8IU81 584 aa12.08□□□□□ -0.48
NRF1-204ENST00000393230 CCDC155Q8N6L0 562 aa12.08□□□□□ -0.48
NRF1-204ENST00000393230 LRRC15Q8TF66 581 aa12.08□□□□□ -0.48
NRF1-204ENST00000393230 STK17AQ9UEE5 414 aa12.08□□□□□ -0.48
NRF1-204ENST00000393230 ARFGEF1Q9Y6D6 1849 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 LGALS16A8MUM7 142 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 CLK2P49760 499 aaKnown RBP12.07□□□□□ -0.48
NRF1-204ENST00000393230 SNAP25P60880 206 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 PDIA5Q14554 519 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 QRICH1Q2TAL8 776 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 SV2BQ7L1I2 683 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 P2RX5Q93086 422 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 SMARCAL1Q9NZC9 954 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 H3BQF6 201 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 CYLC1P35663 651 aaPredicted RBP12.07□□□□□ -0.48
NRF1-204ENST00000393230 PBX1P40424 430 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 CDC37Q16543 378 aaPredicted RBP12.07□□□□□ -0.48
NRF1-204ENST00000393230 KCTD19Q17RG1 926 aaPredicted RBP12.07□□□□□ -0.48
NRF1-204ENST00000393230 RSRC2Q7L4I2 434 aaKnown RBP12.07□□□□□ -0.48
NRF1-204ENST00000393230 RRAGAQ7L523 313 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 FAM151AQ8WW52 585 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 CCDC51Q96ER9 411 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 MTMR9Q96QG7 549 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 LACRTQ9GZZ8 138 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 F5H6K3 240 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 KRT86O43790 486 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 PPP1R11O60927 126 aaPredicted RBP12.07□□□□□ -0.48
NRF1-204ENST00000393230 GDF11O95390 407 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 HOXA7P31268 230 aaPredicted RBP12.07□□□□□ -0.48
NRF1-204ENST00000393230 KLRC3Q07444 240 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 CCDC40Q4G0X9 1142 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 FKBP1CQ5VVH2 108 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 TRMT1LQ7Z2T5 733 aaKnown RBP12.07□□□□□ -0.48
NRF1-204ENST00000393230 NIM1KQ8IY84 436 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 TRIM9Q9C026 710 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 LRRC27Q9C0I9 530 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 ANKZF1Q9H8Y5 726 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 ARHGEF10LQ9HCE6 1279 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 PCDHA1Q9Y5I3 950 aa12.07□□□□□ -0.48
NRF1-204ENST00000393230 RHOBTB3O94955 611 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 HNRNPH2P55795 449 aaKnown RBP12.06□□□□□ -0.48
NRF1-204ENST00000393230 KIF5AQ12840 1032 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 AP3B2Q13367 1082 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 TEX2Q8IWB9 1127 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 GLIS3Q8NEA6 775 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 AMNQ9BXJ7 453 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 FUT8Q9BYC5 575 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 NHEJ1Q9H9Q4 299 aaPredicted RBP12.06□□□□□ -0.48
NRF1-204ENST00000393230 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.06□□□□□ -0.48
NRF1-204ENST00000393230 FAN1Q9Y2M0 1017 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 SAR1BQ9Y6B6 198 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 PSMD14O00487 310 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 GH2P01242 217 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 DPEP1P16444 411 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 DNM2P50570 870 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 GOLGA6L1Q8N7Z2 621 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 AGBL3Q8NEM8 1001 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 MMS19Q96T76 1030 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 GMLQ99445 158 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.06□□□□□ -0.48
NRF1-204ENST00000393230 CCDC151A5D8V7 595 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 BUB1O43683 1085 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 EIF3JO75822 258 aaKnown RBP12.06□□□□□ -0.48
NRF1-204ENST00000393230 RAD17O75943 681 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 BMP3P12645 472 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 CAPN2P17655 700 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 ARHGAP25P42331 645 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 EPS15P42566 896 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 C2orf54Q08AI8 447 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 TRIM14Q14142 442 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 DNAJC21Q5F1R6 531 aaKnown RBP12.06□□□□□ -0.48
NRF1-204ENST00000393230 CCDC181Q5TID7 509 aa12.06□□□□□ -0.48
NRF1-204ENST00000393230 KRT79Q5XKE5 535 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms