RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TFRCP02786 760 aaKnown RBP11.61□□□□□ -0.55
CALD1-203ENST00000393118 NR2F2P24468 414 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 QRICH1Q2TAL8 776 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 VWA3BQ502W6 1294 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 ANO3Q9BYT9 981 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 HSD3B7Q9H2F3 369 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 PI4KBQ9UBF8 816 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 ARMCX3Q9UH62 379 aaPredicted RBP11.61□□□□□ -0.55
CALD1-203ENST00000393118 LCMT1Q9UIC8 334 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 SUFUQ9UMX1 484 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 SFI1A8K8P3 1242 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 MOCS3O95396 460 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 GH2P01242 217 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 MAP3K9P80192 1104 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 CC2D1AQ6P1N0 951 aaPredicted RBP11.6□□□□□ -0.55
CALD1-203ENST00000393118 TRIM65Q6PJ69 517 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 UNC13DQ70J99 1090 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 TRIM58Q8NG06 486 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 FAN1Q9Y2M0 1017 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 CLIC2O15247 247 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 RAD17O75943 681 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 NPR1P16066 1061 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 PEX19P40855 299 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 DLGAP5Q15398 846 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 IL17AQ16552 155 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 TBC1D10BQ4KMP7 808 aaPredicted RBP11.6□□□□□ -0.55
CALD1-203ENST00000393118 C8orf74Q6P047 294 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 SND1Q7KZF4 910 aaKnown RBP eCLIP11.6□□□□□ -0.55
CALD1-203ENST00000393118 ABCB6Q9NP58 842 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 CCDC151A5D8V7 595 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 MYMKA6NI61 221 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 ADAMTS3O15072 1205 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 ZEB2O60315 1214 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 RHOBTB3O94955 611 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 ERVK-24P63145 666 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 CETN1Q12798 172 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 NFIAQ12857 509 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 BIRC2Q13490 618 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 KCNB1Q14721 858 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 CDKAL1Q5VV42 579 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 MKRN1Q9UHC7 482 aaKnown RBP11.6□□□□□ -0.55
CALD1-203ENST00000393118 SLC37A4O43826 429 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 GAS7O60861 476 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 XRCC5P13010 732 aaKnown RBP11.6□□□□□ -0.55
CALD1-203ENST00000393118 CYP2J2P51589 502 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 KIF11P52732 1056 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 KIAA0753Q2KHM9 967 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 TMED8Q6PL24 325 aaPredicted RBP11.6□□□□□ -0.55
CALD1-203ENST00000393118 KLHL7Q8IXQ5 586 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 GIMAP8Q8ND71 665 aaPredicted RBP11.6□□□□□ -0.55
CALD1-203ENST00000393118 AFAP1L1Q8TED9 768 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 GOPCQ9HD26 462 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 COL4A3BPQ9Y5P4 624 aa11.6□□□□□ -0.55
CALD1-203ENST00000393118 POTEFA5A3E0 1075 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 TUBBP07437 444 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 POTEIP0CG38 1075 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 PRPHP41219 470 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 C2orf54Q08AI8 447 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 ZNF543Q08ER8 600 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 POTEGQ6S5H5 508 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 POTEEQ6S8J3 1075 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 MMS22LQ6ZRQ5 1243 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 MIGA2Q7L4E1 593 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 RETREG2Q8NC44 543 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 YY1AP1Q9H869 796 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 MYO1AQ9UBC5 1043 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 CAPN7Q9Y6W3 813 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 NPHP3-ACAD11A0A0J9YXS1 232 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 TMEM110-MUSTN1A8MSY1 372 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 ECM2O94769 699 aaPredicted RBP11.59□□□□□ -0.55
CALD1-203ENST00000393118 KRT13P13646 458 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 SSR1P43307 286 aaKnown RBP11.59□□□□□ -0.55
CALD1-203ENST00000393118 VAV2P52735 878 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 TMEM132AQ24JP5 1023 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 RAD54LQ92698 747 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 EXOC4Q96A65 974 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 HSF2BPO75031 334 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 BMP3P12645 472 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 CDC42EP5Q6NZY7 148 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 SLFN12Q8IYM2 578 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 BHMT2Q9H2M3 363 aa11.59□□□□□ -0.55
CALD1-203ENST00000393118 ARHGEF35A5YM69 484 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 LRRC53A6NM62 1247 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 hCG_1984214I3L0E3 225 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 PRPF6O94906 941 aaKnown RBP11.58□□□□□ -0.56
CALD1-203ENST00000393118 GCFC2P16383 781 aaKnown RBP11.58□□□□□ -0.56
CALD1-203ENST00000393118 TRAF1Q13077 416 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 TBX2Q13207 712 aaPredicted RBP11.58□□□□□ -0.56
CALD1-203ENST00000393118 ARHGAP44Q17R89 818 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 TMC4Q7Z404 712 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 SP8Q8IXZ3 490 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 ZNF713Q8N859 430 aaPredicted RBP11.58□□□□□ -0.56
CALD1-203ENST00000393118 FAM133AQ8N9E0 248 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 PIGOQ8TEQ8 1089 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 TBC1D5Q92609 795 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 JMJD4Q9H9V9 463 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 MLXIPQ9HAP2 919 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 F5H6K3 240 aa11.58□□□□□ -0.56
CALD1-203ENST00000393118 CALUO43852 315 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms