RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TUBGCP2Q9BSJ2 902 aa16.14■□□□□ 0.17
VPS9D1-201ENST00000389386 ARHGAP20Q9P2F6 1191 aa16.14■□□□□ 0.17
VPS9D1-201ENST00000389386 CPSF2Q9P2I0 782 aaKnown RBP16.14■□□□□ 0.17
VPS9D1-201ENST00000389386 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.14■□□□□ 0.17
VPS9D1-201ENST00000389386 GSTA1P08263 222 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 CDC25CP30307 473 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 HNRNPH3P31942 346 aaKnown RBP16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 UAP1Q16222 522 aaPredicted RBP16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 KRT27Q7Z3Y8 459 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 KRT12Q99456 494 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 NOP53Q9NZM5 478 aaKnown RBP16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 MAGEC2Q9UBF1 373 aaPredicted RBP16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 CCNL1Q9UK58 526 aaPredicted RBP16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 FBXO3Q9UK99 471 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 SLC12A4Q9UP95 1085 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 A0A1W2PQJ5 194 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 ERVV-1B6SEH8 477 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 BMP15O95972 392 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 RPS6KA3P51812 740 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 THEMIS2Q5TEJ8 643 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 TYW1BQ6NUM6 668 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 RUFY4Q6ZNE9 571 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 PNMA8AQ86V59 439 aaPredicted RBP16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 AGAP11Q8TF27 550 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 PANK4Q9NVE7 773 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 MYH3P11055 1940 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 BTAF1O14981 1849 aa16.13■□□□□ 0.17
VPS9D1-201ENST00000389386 AKAP11Q9UKA4 1901 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 LIN7AO14910 233 aaPredicted RBP16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 RAB27AP51159 221 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 KIF11P52732 1056 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 SNX1Q13596 522 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 ODF2Q5BJF6 829 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 FIGNQ5HY92 759 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 AGBL2Q5U5Z8 902 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 AMIGO3Q86WK7 504 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 ZNF526Q8TF50 670 aaPredicted RBP16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 KCNMB3Q9NPA1 279 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 SLC5A4Q9NY91 659 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 PLAGL2Q9UPG8 496 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 ZNF532Q9HCE3 1301 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 GOLGB1Q14789 3259 aaKnown RBP16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 PJA2O43164 708 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 CAMTA2O94983 1202 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 MYBP10242 640 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 ZNF268Q14587 947 aaPredicted RBP16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 ZNF174Q15697 407 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 TSKSQ9UJT2 592 aa16.12■□□□□ 0.17
VPS9D1-201ENST00000389386 ALADP13716 330 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 EIF4A3P38919 411 aaKnown RBP16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 PRPHP41219 470 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 BLMHQ13867 455 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 ZC3H12AQ5D1E8 599 aaKnown RBP16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 CCDC24Q8N4L8 307 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 ANKRD13CQ8N6S4 541 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 CCDC197Q8NCU1 140 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 MTMR8Q96EF0 704 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 TRIM47Q96LD4 638 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 PCMTD1Q96MG8 357 aaPredicted RBP16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 UBAC1Q9BSL1 405 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 A6NHS1 94 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 DIAPH2O60879 1101 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 FESP07332 822 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 ADD2P35612 726 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 BCAMP50895 628 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 TBC1D1Q86TI0 1168 aaPredicted RBP16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 EIF1ADQ8N9N8 165 aaKnown RBP16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 CNKSR1Q969H4 720 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 YIPF3Q9GZM5 350 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 BRWD3Q6RI45 1802 aa16.11■□□□□ 0.17
VPS9D1-201ENST00000389386 CFAP73A6NFT4 308 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 RAD51CO43502 376 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 LINGO3P0C6S8 592 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 ECHS1P30084 290 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 MAGEA1P43355 309 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 PTGDRQ13258 359 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 RASGRF1Q13972 1273 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 TTI2Q6NXR4 508 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 C2CD5Q86YS7 1000 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 CHMP6Q96FZ7 201 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 PYM1Q9BRP8 204 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 ISCUQ9H1K1 167 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 NOVA2Q9UNW9 492 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 DCDC2CA8MYV0 355 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 PDE6AP16499 860 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 CTNNA1P35221 906 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 PDE6BP35913 854 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 PUM3Q15397 648 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 NOC3LQ8WTT2 800 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 LPIN2Q92539 896 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 NOX5Q96PH1 765 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 SWAP70Q9UH65 585 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 GRID2IPA4D2P6 1211 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 GNPATO15228 680 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 ATP2C1P98194 919 aaPredicted RBP16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 SLC5A9Q2M3M2 681 aa16.1■□□□□ 0.17
VPS9D1-201ENST00000389386 C3orf67Q6ZVT6 689 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms