RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 XKR9Q5GH70 373 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 SLC30A10Q6XR72 485 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 FBXO28Q9NVF7 368 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 OGFRQ9NZT2 677 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 DPEP1P16444 411 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 COASYQ13057 564 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 RGS22Q8NE09 1264 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 PAGR1Q9BTK6 254 aa13.8□□□□□ -0.2
CDX2-201ENST00000381020 SEC31AO94979 1220 aaKnown RBP13.79□□□□□ -0.2
CDX2-201ENST00000381020 LMAN1P49257 510 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 SPP2Q13103 211 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 FAM102BQ5T8I3 360 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 CCDC127Q96BQ5 260 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 RAVER2Q9HCJ3 691 aaKnown RBP13.79□□□□□ -0.2
CDX2-201ENST00000381020 MYO6Q9UM54 1294 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 ADGRG1Q9Y653 693 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 K7ENM7 598 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 RGL2O15211 777 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 CRY2Q49AN0 593 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 SFR1Q86XK3 245 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 GOLGA6L10A6NI86 522 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 ABCB4P21439 1286 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 RASA3Q14644 834 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 SHROOM1Q2M3G4 852 aaPredicted RBP13.79□□□□□ -0.2
CDX2-201ENST00000381020 VWA3BQ502W6 1294 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 NOX5Q96PH1 765 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 PCIF1Q9H4Z3 704 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 NHEJ1Q9H9Q4 299 aaPredicted RBP13.79□□□□□ -0.2
CDX2-201ENST00000381020 PRR12Q9ULL5 1215 aa13.79□□□□□ -0.2
CDX2-201ENST00000381020 CXCR5P32302 372 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 EIF4A3P38919 411 aaKnown RBP13.78□□□□□ -0.2
CDX2-201ENST00000381020 ZBED6P86452 979 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 AP3B2Q13367 1082 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 MCTP2Q6DN12 878 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 ZDHHC15Q96MV8 337 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 NYAP2Q9P242 653 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 LARSQ9P2J5 1176 aaKnown RBP13.78□□□□□ -0.2
CDX2-201ENST00000381020 ZMYND10O75800 440 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 CCDC172P0C7W6 258 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 SMTNP53814 917 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 PPARDQ03181 441 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 EXOC3L4Q17RC7 722 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 FBXO38Q6PIJ6 1188 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 CTNNBL1Q8WYA6 563 aaPredicted RBP13.78□□□□□ -0.2
CDX2-201ENST00000381020 FAM163AQ96GL9 167 aaPredicted RBP13.78□□□□□ -0.2
CDX2-201ENST00000381020 TSGA10Q9BZW7 698 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 CDC23Q9UJX2 597 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
CDX2-201ENST00000381020 EFCAB8A8MWE9 144 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 MCM3P25205 808 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 KIAA0753Q2KHM9 967 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 PDXDC2PQ6P474 469 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 RAD9BQ6WBX8 426 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 AGPAT5Q9NUQ2 364 aa13.78□□□□□ -0.2
CDX2-201ENST00000381020 ZNF70Q9UC06 446 aaPredicted RBP13.78□□□□□ -0.2
CDX2-201ENST00000381020 ADAMTS3O15072 1205 aa13.77□□□□□ -0.2
CDX2-201ENST00000381020 RHOBTB3O94955 611 aa13.77□□□□□ -0.2
CDX2-201ENST00000381020 GNA14O95837 355 aa13.77□□□□□ -0.2
CDX2-201ENST00000381020 BIRC3Q13489 604 aa13.77□□□□□ -0.2
CDX2-201ENST00000381020 IFI16Q16666 785 aaKnown RBP13.77□□□□□ -0.2
CDX2-201ENST00000381020 UTP14CQ5TAP6 766 aaKnown RBP13.77□□□□□ -0.2
CDX2-201ENST00000381020 KRT26Q7Z3Y9 468 aa13.77□□□□□ -0.2
CDX2-201ENST00000381020 BANK1Q8NDB2 785 aa13.77□□□□□ -0.2
CDX2-201ENST00000381020 BCCIPQ9P287 314 aaKnown RBP eCLIP13.77□□□□□ -0.2
CDX2-201ENST00000381020 BCL9LQ86UU0 1499 aa13.77□□□□□ -0.2
CDX2-201ENST00000381020 ABCB11O95342 1321 aa13.77□□□□□ -0.2
CDX2-201ENST00000381020 KCNB1Q14721 858 aa13.77□□□□□ -0.21
CDX2-201ENST00000381020 FAM133AQ8N9E0 248 aa13.77□□□□□ -0.21
CDX2-201ENST00000381020 SERPINA10Q9UK55 444 aa13.77□□□□□ -0.21
CDX2-201ENST00000381020 PHLPP2Q6ZVD8 1323 aa13.77□□□□□ -0.21
CDX2-201ENST00000381020 PVALEFA0A1B0GWK0 134 aa13.77□□□□□ -0.21
CDX2-201ENST00000381020 ERLIN2O94905 339 aa13.77□□□□□ -0.21
CDX2-201ENST00000381020 MYCNP04198 464 aaPredicted RBP13.77□□□□□ -0.21
CDX2-201ENST00000381020 GYPCP04921 128 aa13.77□□□□□ -0.21
CDX2-201ENST00000381020 TNFAIP3P21580 790 aa13.77□□□□□ -0.21
CDX2-201ENST00000381020 KLK7P49862 253 aa13.77□□□□□ -0.21
CDX2-201ENST00000381020 MRPS25P82663 173 aaKnown RBP13.77□□□□□ -0.21
CDX2-201ENST00000381020 DCAF15Q66K64 600 aa13.77□□□□□ -0.21
CDX2-201ENST00000381020 RIOX1Q9H6W3 641 aa13.77□□□□□ -0.21
CDX2-201ENST00000381020 TFR2Q9UP52 801 aa13.77□□□□□ -0.21
CDX2-201ENST00000381020 MDM2Q00987 491 aaPredicted RBP13.76□□□□□ -0.21
CDX2-201ENST00000381020 LRRC63Q05C16 580 aa13.76□□□□□ -0.21
CDX2-201ENST00000381020 RSBN1LQ6PCB5 846 aaPredicted RBP13.76□□□□□ -0.21
CDX2-201ENST00000381020 GIMAP8Q8ND71 665 aaPredicted RBP13.76□□□□□ -0.21
CDX2-201ENST00000381020 U2AF1L4Q8WU68 220 aaKnown RBP13.76□□□□□ -0.21
CDX2-201ENST00000381020 DYDC2Q96IM9 177 aa13.76□□□□□ -0.21
CDX2-201ENST00000381020 PKNOX2Q96KN3 472 aa13.76□□□□□ -0.21
CDX2-201ENST00000381020 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.76□□□□□ -0.21
CDX2-201ENST00000381020 ADAMTS1Q9UHI8 967 aa13.76□□□□□ -0.21
CDX2-201ENST00000381020 HERC5Q9UII4 1024 aaKnown RBP13.76□□□□□ -0.21
CDX2-201ENST00000381020 ZNRF3Q9ULT6 936 aa13.76□□□□□ -0.21
CDX2-201ENST00000381020 GJC1P36383 396 aa13.76□□□□□ -0.21
CDX2-201ENST00000381020 SARSP49591 514 aaKnown RBP13.76□□□□□ -0.21
CDX2-201ENST00000381020 IL17AQ16552 155 aa13.76□□□□□ -0.21
CDX2-201ENST00000381020 DNAJC21Q5F1R6 531 aaKnown RBP13.76□□□□□ -0.21
CDX2-201ENST00000381020 PPP1R18Q6NYC8 613 aa13.76□□□□□ -0.21
CDX2-201ENST00000381020 LDHDQ86WU2 507 aa13.76□□□□□ -0.21
CDX2-201ENST00000381020 ANKRD35Q8N283 1001 aa13.76□□□□□ -0.21
CDX2-201ENST00000381020 NUDT12Q9BQG2 462 aa13.76□□□□□ -0.21
CDX2-201ENST00000381020 KRT5P13647 590 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms