RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CPLX3Q8WVH0 158 aa25.74■■□□□ 1.71
VPS16-201ENST00000380443 ANKRD7Q92527 254 aa25.74■■□□□ 1.71
VPS16-201ENST00000380443 DNAJC19Q96DA6 116 aa25.74■■□□□ 1.71
VPS16-201ENST00000380443 TSG101Q99816 390 aa25.74■■□□□ 1.71
VPS16-201ENST00000380443 SLC39A2Q9NP94 309 aa25.74■■□□□ 1.71
VPS16-201ENST00000380443 MRPL11Q9Y3B7 192 aaKnown RBP25.74■■□□□ 1.71
VPS16-201ENST00000380443 TOGARAM2Q6ZUX3 1019 aa25.74■■□□□ 1.71
VPS16-201ENST00000380443 CNOT6LQ96LI5 555 aaKnown RBP25.74■■□□□ 1.71
VPS16-201ENST00000380443 PITPNM2Q9BZ72 1349 aa25.73■■□□□ 1.71
VPS16-201ENST00000380443 RBM10P98175 930 aaKnown RBP25.73■■□□□ 1.71
VPS16-201ENST00000380443 TNFAIP1Q13829 316 aa25.73■■□□□ 1.71
VPS16-201ENST00000380443 ECM1Q16610 540 aa25.73■■□□□ 1.71
VPS16-201ENST00000380443 PRR16Q569H4 304 aa25.73■■□□□ 1.71
VPS16-201ENST00000380443 FAM83BQ5T0W9 1011 aa25.73■■□□□ 1.71
VPS16-201ENST00000380443 DYMQ7RTS9 669 aa25.73■■□□□ 1.71
VPS16-201ENST00000380443 KCNK18Q7Z418 384 aa25.73■■□□□ 1.71
VPS16-201ENST00000380443 SEMA6BQ9H3T3 888 aa25.73■■□□□ 1.71
VPS16-201ENST00000380443 CAPN11Q9UMQ6 739 aa25.73■■□□□ 1.71
VPS16-201ENST00000380443 ZC3H4Q9UPT8 1303 aaKnown RBP25.73■■□□□ 1.71
VPS16-201ENST00000380443 OPLAHO14841 1288 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 PLA2G4BP0C869 781 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 IDEP14735 1019 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 TSR1Q2NL82 804 aaKnown RBP25.72■■□□□ 1.71
VPS16-201ENST00000380443 SPICE1Q8N0Z3 855 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 TMEM39BQ9GZU3 492 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 MYOZ2Q9NPC6 264 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 DNAI1Q9UI46 699 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 KIAA1024Q9UPX6 916 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 ADGRG1Q9Y653 693 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 WNT10BO00744 389 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 RPA1P27694 616 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 KRT9P35527 623 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 MTIF2P46199 727 aaKnown RBP25.72■■□□□ 1.71
VPS16-201ENST00000380443 ZNF280AP59817 542 aaPredicted RBP25.72■■□□□ 1.71
VPS16-201ENST00000380443 SNAP25P60880 206 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 SPIRE1Q08AE8 756 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 FIGNQ5HY92 759 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 OR8K1Q8NGG5 319 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 LENG9Q96B70 501 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 DEFB129Q9H1M3 183 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 PANK4Q9NVE7 773 aa25.72■■□□□ 1.71
VPS16-201ENST00000380443 LUC7L2Q9Y383 392 aaKnown RBP25.72■■□□□ 1.71
VPS16-201ENST00000380443 GCOM1H8Y6P7 765 aaPredicted RBP25.71■■□□□ 1.71
VPS16-201ENST00000380443 POLR2MP0CAP2 368 aa25.71■■□□□ 1.71
VPS16-201ENST00000380443 PRELPP51888 382 aa25.71■■□□□ 1.71
VPS16-201ENST00000380443 FKBP15Q5T1M5 1219 aa25.71■■□□□ 1.71
VPS16-201ENST00000380443 MYOCDQ8IZQ8 938 aa25.71■■□□□ 1.71
VPS16-201ENST00000380443 ERGIC2Q96RQ1 377 aa25.71■■□□□ 1.71
VPS16-201ENST00000380443 P2RX7Q99572 595 aaKnown RBP25.71■■□□□ 1.71
VPS16-201ENST00000380443 RABGAP1Q9Y3P9 1069 aa25.71■■□□□ 1.71
VPS16-201ENST00000380443 SOWAHDA6NJG2 315 aa25.7■■□□□ 1.71
VPS16-201ENST00000380443 ZNF76P36508 570 aa25.7■■□□□ 1.71
VPS16-201ENST00000380443 COASYQ13057 564 aa25.7■■□□□ 1.71
VPS16-201ENST00000380443 TBC1D8BQ0IIM8 1120 aa25.7■■□□□ 1.7
VPS16-201ENST00000380443 KIAA1755Q5JYT7 1200 aa25.7■■□□□ 1.7
VPS16-201ENST00000380443 FAM26FQ5R3K3 315 aa25.7■■□□□ 1.7
VPS16-201ENST00000380443 RAD9BQ6WBX8 426 aa25.7■■□□□ 1.7
VPS16-201ENST00000380443 ZNF710Q8N1W2 664 aa25.7■■□□□ 1.7
VPS16-201ENST00000380443 DNAJC7Q99615 494 aa25.7■■□□□ 1.7
VPS16-201ENST00000380443 POLR3CQ9BUI4 534 aaPredicted RBP25.7■■□□□ 1.7
VPS16-201ENST00000380443 NOC4LQ9BVI4 516 aaKnown RBP25.7■■□□□ 1.7
VPS16-201ENST00000380443 DNM3Q9UQ16 869 aa25.7■■□□□ 1.7
VPS16-201ENST00000380443 A0A1W2PQJ5 194 aa25.68■■□□□ 1.7
VPS16-201ENST00000380443 FRMD3A2A2Y4 597 aa25.68■■□□□ 1.7
VPS16-201ENST00000380443 FAM86B1E9PN63 330 aa25.68■■□□□ 1.7
VPS16-201ENST00000380443 FAM86B2P0C5J1 330 aa25.68■■□□□ 1.7
VPS16-201ENST00000380443 CASQ1P31415 396 aa25.68■■□□□ 1.7
VPS16-201ENST00000380443 DICER1Q9UPY3 1922 aaKnown RBP25.68■■□□□ 1.7
VPS16-201ENST00000380443 POTEB3A0JP26 581 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 POTECB2RU33 542 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 B4DLN1 442 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 E9PMD0 336 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 PES1O00541 588 aaKnown RBP25.67■■□□□ 1.7
VPS16-201ENST00000380443 MSH4O15457 936 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 MUTP22033 750 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 SLC12A3P55017 1021 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 NCBP1Q09161 790 aaKnown RBP25.67■■□□□ 1.7
VPS16-201ENST00000380443 POTEBQ6S5H4 581 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 GPBP1Q86WP2 473 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 LPAR1Q92633 364 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 PNMA2Q9UL42 364 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 MED24O75448 989 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 GNA14O95837 355 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 CYP11B2P19099 503 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 GNG11P61952 73 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 MAN2A1Q16706 1144 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 CATSPER3Q86XQ3 398 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 SYT2Q8N9I0 419 aaPredicted RBP25.67■■□□□ 1.7
VPS16-201ENST00000380443 GJA10Q969M2 543 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 CEP63Q96MT8 703 aa25.67■■□□□ 1.7
VPS16-201ENST00000380443 ZNF215Q9UL58 517 aaPredicted RBP25.67■■□□□ 1.7
VPS16-201ENST00000380443 TTC26A0AVF1 554 aa25.66■■□□□ 1.7
VPS16-201ENST00000380443 SSBP05455 408 aaKnown RBP eCLIP25.66■■□□□ 1.7
VPS16-201ENST00000380443 HOXA13P31271 388 aaPredicted RBP25.66■■□□□ 1.7
VPS16-201ENST00000380443 FKBP3Q00688 224 aaKnown RBP25.66■■□□□ 1.7
VPS16-201ENST00000380443 KIF4BQ2VIQ3 1234 aa25.66■■□□□ 1.7
VPS16-201ENST00000380443 NBPF9Q3BBW0 867 aa25.66■■□□□ 1.7
VPS16-201ENST00000380443 VWA3BQ502W6 1294 aa25.66■■□□□ 1.7
VPS16-201ENST00000380443 MIIPQ5JXC2 388 aa25.66■■□□□ 1.7
VPS16-201ENST00000380443 NCAPH2Q6IBW4 605 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms