RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 CMA1P23946 247 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 GARSP41250 739 aaKnown RBP11.89□□□□□ -0.51
LINC00654-201ENST00000379053 APOA5Q6Q788 366 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 ADAT2Q7Z6V5 191 aaKnown RBP11.89□□□□□ -0.51
LINC00654-201ENST00000379053 AFAP1L1Q8TED9 768 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 STXBP2Q15833 593 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 ZNF653Q96CK0 615 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 EEF2KMTQ96G04 330 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 NCAPGQ9BPX3 1015 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 CUEDC2Q9H467 287 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 PIDD1Q9HB75 910 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 ATG3Q9NT62 314 aa11.89□□□□□ -0.51
LINC00654-201ENST00000379053 CYP2D7A0A087X1C5 515 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 TTC36A6NLP5 189 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 MED7O43513 233 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 RNF219Q5W0B1 726 aaPredicted RBP11.88□□□□□ -0.51
LINC00654-201ENST00000379053 FASTKD5Q7L8L6 764 aaKnown RBP11.88□□□□□ -0.51
LINC00654-201ENST00000379053 PODNQ7Z5L7 613 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 EFCAB13Q8IY85 973 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 ATP6V1E2Q96A05 226 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 AK8Q96MA6 479 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 VCX3BQ9H321 246 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 ZSWIM6Q9HCJ5 1215 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 DDX41Q9UJV9 622 aaKnown RBP11.88□□□□□ -0.51
LINC00654-201ENST00000379053 OR6B2Q6IFH4 312 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 TRIML1Q8N9V2 468 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 MGARPQ8TDB4 240 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 XPO4Q9C0E2 1151 aaKnown RBP11.88□□□□□ -0.51
LINC00654-201ENST00000379053 SMYD2Q9NRG4 433 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 PPME1Q9Y570 386 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 SPATA31A3Q5VYP0 1347 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 CD58P19256 250 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 KRT33BQ14525 404 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 ARHGAP24Q8N264 748 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 OGFRQ9NZT2 677 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 CLIC2O15247 247 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 YWHAGP61981 247 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC00654-201ENST00000379053 ATP11AP98196 1134 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 TWF2Q6IBS0 349 aaKnown RBP11.88□□□□□ -0.51
LINC00654-201ENST00000379053 SNRNP48Q6IEG0 339 aaKnown RBP11.88□□□□□ -0.51
LINC00654-201ENST00000379053 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 MOSPD1Q9UJG1 213 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 NDUFAB1O14561 156 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 ACTN1P12814 892 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 ATF2P15336 505 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 LRRC41Q15345 812 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 SURF1Q15526 300 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 THEM5Q8N1Q8 247 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 TRIM11Q96F44 468 aa11.88□□□□□ -0.51
LINC00654-201ENST00000379053 HEXIM2Q96MH2 286 aaKnown RBP11.88□□□□□ -0.51
LINC00654-201ENST00000379053 K7ERI5 159 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 NFKBIAP25963 317 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 RASGRF1Q13972 1273 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 MESDQ14696 234 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 PPP2R5EQ16537 467 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 FAM83BQ5T0W9 1011 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 TCP11Q8WWU5 503 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 BZW2Q9Y6E2 419 aaKnown RBP11.87□□□□□ -0.51
LINC00654-201ENST00000379053 PNMA6FA0A0J9YX94 578 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 STX2P32856 288 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 NKX1-1Q15270 411 aaPredicted RBP11.87□□□□□ -0.51
LINC00654-201ENST00000379053 SCARA5Q6ZMJ2 495 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 MSTO1Q9BUK6 570 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 VCXQ9H320 206 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 RAVER2Q9HCJ3 691 aaKnown RBP11.87□□□□□ -0.51
LINC00654-201ENST00000379053 USP6P35125 1406 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 CLGNO14967 610 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 RGS16O15492 202 aaPredicted RBP11.87□□□□□ -0.51
LINC00654-201ENST00000379053 DDIT3P35638 169 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 IQCB1Q15051 598 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 JADE1Q6IE81 842 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 CNOT6LQ96LI5 555 aaKnown RBP11.87□□□□□ -0.51
LINC00654-201ENST00000379053 FOXP1Q9H334 677 aaPredicted RBP11.87□□□□□ -0.51
LINC00654-201ENST00000379053 SAR1BQ9Y6B6 198 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 RECQLP46063 649 aaPredicted RBP11.87□□□□□ -0.51
LINC00654-201ENST00000379053 CACNA2D3Q8IZS8 1091 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 FAM81BQ96LP2 452 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 ABCF3Q9NUQ8 709 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 BAG5Q9UL15 447 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 DNMT1P26358 1616 aaKnown RBP11.87□□□□□ -0.51
LINC00654-201ENST00000379053 DNAAF3Q8N9W5 541 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 OR6B3Q8NGW1 331 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 RMDN3Q96TC7 470 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 PARVGQ9HBI0 331 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 HYOU1Q9Y4L1 999 aa11.87□□□□□ -0.51
LINC00654-201ENST00000379053 KDM5DQ9BY66 1539 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 USP17L10C9JJH3 530 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 CIITAP33076 1130 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 PDE1BQ01064 536 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 RAPH1Q70E73 1250 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 CCDC13Q8IYE1 715 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 THNSL1Q8IYQ7 743 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 FBXO18Q8NFZ0 1043 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 FAM167AQ96KS9 214 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 STK17AQ9UEE5 414 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 MAGED2Q9UNF1 606 aaPredicted RBP11.86□□□□□ -0.51
LINC00654-201ENST00000379053 SSH2Q76I76 1423 aa11.86□□□□□ -0.51
LINC00654-201ENST00000379053 TNPO2O14787 897 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms