RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 TPM1P09493 284 aa16.48■□□□□ 0.23
RAB3IP-203ENST00000378809 UBXN1Q04323 297 aa16.48■□□□□ 0.23
RAB3IP-203ENST00000378809 RBL2Q08999 1139 aa16.48■□□□□ 0.23
RAB3IP-203ENST00000378809 ANKRD40Q6AI12 368 aa16.48■□□□□ 0.23
RAB3IP-203ENST00000378809 TMX1Q9H3N1 280 aa16.48■□□□□ 0.23
RAB3IP-203ENST00000378809 CTDP1Q9Y5B0 961 aaPredicted RBP16.48■□□□□ 0.23
RAB3IP-203ENST00000378809 ICAM1P05362 532 aa16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 EEF1GP26641 437 aaKnown RBP16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 SPIRE1Q08AE8 756 aa16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 RAD51AP2Q09MP3 1159 aa16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 CEP135Q66GS9 1140 aa16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 GPBP1Q86WP2 473 aa16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 CATSPER3Q86XQ3 398 aa16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 IRF2BP1Q8IU81 584 aa16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 TRPM4Q8TD43 1214 aa16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 NOC3LQ8WTT2 800 aaKnown RBP16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 ZFP91Q96JP5 570 aaPredicted RBP16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 PPP1R13BQ96KQ4 1090 aa16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 WRNIP1Q96S55 665 aa16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 FZD1Q9UP38 647 aa16.47■□□□□ 0.23
RAB3IP-203ENST00000378809 MEIS1O00470 390 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 PRKCSHP14314 528 aaPredicted RBP16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 PBX1P40424 430 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 KCNJ6P48051 423 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 CYP4A11Q02928 519 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 APOBEC3FQ8IUX4 373 aaKnown RBP16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 TEX2Q8IWB9 1127 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 ZKSCAN4Q969J2 545 aaPredicted RBP16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 DUSP9Q99956 384 aaKnown RBP16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 HOMER2Q9NSB8 354 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 GINM1Q9NU53 330 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 PANK4Q9NVE7 773 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 ARHGAP6O43182 974 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 CHMP2AO43633 222 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 VCAM1P19320 739 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 CACNB1Q02641 598 aaPredicted RBP16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 COASYQ13057 564 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 SPP2Q13103 211 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 LRRC41Q15345 812 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 WDR18Q9BV38 432 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 ZHX3Q9H4I2 956 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 PICK1Q9NRD5 415 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 KCND1Q9NSA2 647 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 GGA3Q9NZ52 723 aa16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.46■□□□□ 0.23
RAB3IP-203ENST00000378809 IGLV3-22A0A075B6J6 115 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 NPHP3-ACAD11A0A0J9YXS1 232 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 SLC26A4O43511 780 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 ALAS1P13196 640 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 CASP14P31944 242 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 COBLL1Q53SF7 1204 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 FAM114A1Q8IWE2 563 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 CCDC65Q8IXS2 484 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 UPF1Q92900 1129 aaKnown RBP eCLIP16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 DNAJC19Q96DA6 116 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 CNOT6LQ96LI5 555 aaKnown RBP16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 SEMA6BQ9H3T3 888 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 RPAP3Q9H6T3 665 aaPredicted RBP16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 RAVER2Q9HCJ3 691 aaKnown RBP16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 TBC1D7Q9P0N9 293 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 VAV3Q9UKW4 847 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 DNM3Q9UQ16 869 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 ZNF536O15090 1300 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 ITIH6Q6UXX5 1313 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 NFIBO00712 420 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 CCP110O43303 1012 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 STX10O60499 249 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 RPA1P27694 616 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 MTIF2P46199 727 aaKnown RBP16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 USP14P54578 494 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 PSMD2Q13200 908 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 PABPC4Q13310 644 aaKnown RBP eCLIP16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 LRCH2Q5VUJ6 765 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 NYAP1Q6ZVC0 841 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 TMEM139Q8IV31 216 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 SCYL3Q8IZE3 742 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 MYRIPQ8NFW9 859 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 GPRC5DQ9NZD1 345 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 STK24Q9Y6E0 443 aa16.45■□□□□ 0.22
RAB3IP-203ENST00000378809 MFAP3LO75121 409 aa16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 GYPCP04921 128 aa16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 LMNB1P20700 586 aa16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 CEP55Q53EZ4 464 aa16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 FAM26FQ5R3K3 315 aa16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 SLC30A10Q6XR72 485 aa16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 CNGA4Q8IV77 575 aa16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 GUF1Q8N442 669 aaKnown RBP16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 GLIS3Q8NEA6 775 aa16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 TUBGCP2Q9BSJ2 902 aa16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 AS3MTQ9HBK9 375 aa16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 EMILIN3Q9NT22 766 aa16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 ATAD5Q96QE3 1844 aa16.44■□□□□ 0.22
RAB3IP-203ENST00000378809 LGALS16A8MUM7 142 aa16.43■□□□□ 0.22
RAB3IP-203ENST00000378809 B4DLN1 442 aa16.43■□□□□ 0.22
RAB3IP-203ENST00000378809 SPATA31C1P0DKV0 1188 aa16.43■□□□□ 0.22
RAB3IP-203ENST00000378809 CYP11B2P19099 503 aa16.43■□□□□ 0.22
RAB3IP-203ENST00000378809 PSMC6P62333 389 aa16.43■□□□□ 0.22
RAB3IP-203ENST00000378809 HERC4Q5GLZ8 1057 aaPredicted RBP16.43■□□□□ 0.22
RAB3IP-203ENST00000378809 CENPPQ6IPU0 288 aa16.43■□□□□ 0.22
RAB3IP-203ENST00000378809 GPC2Q8N158 579 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms