RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 OPLAHO14841 1288 aa21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 PPP1R2P41236 205 aa21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 CCDC174Q6PII3 467 aa21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 GPBP1Q86WP2 473 aa21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 GUF1Q8N442 669 aaKnown RBP21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 ZFP91Q96JP5 570 aaPredicted RBP21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 ARHGAP25P42331 645 aa21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 PSMC6P62333 389 aa21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 TEX35Q5T0J7 233 aa21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 FAM83BQ5T0W9 1011 aa21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 CCDC84Q86UT8 332 aaPredicted RBP21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 TBC1D5Q92609 795 aa21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 TMEM39BQ9GZU3 492 aa21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 POLD4Q9HCU8 107 aa21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 GUCA1BQ9UMX6 200 aa21.4■■□□□ 1.02
PCDHA4-201ENST00000378125 KIF4BQ2VIQ3 1234 aa21.39■■□□□ 1.02
PCDHA4-201ENST00000378125 COBLL1Q53SF7 1204 aa21.39■■□□□ 1.02
PCDHA4-201ENST00000378125 FKBP15Q5T1M5 1219 aa21.39■■□□□ 1.02
PCDHA4-201ENST00000378125 CCDC155Q8N6L0 562 aa21.39■■□□□ 1.02
PCDHA4-201ENST00000378125 TTYH3Q9C0H2 523 aa21.39■■□□□ 1.02
PCDHA4-201ENST00000378125 NT5C3AQ9H0P0 336 aa21.39■■□□□ 1.02
PCDHA4-201ENST00000378125 FAM207AQ9NSI2 230 aaPredicted RBP21.39■■□□□ 1.02
PCDHA4-201ENST00000378125 EHHADHQ08426 723 aa21.39■■□□□ 1.01
PCDHA4-201ENST00000378125 AP3B2Q13367 1082 aa21.39■■□□□ 1.01
PCDHA4-201ENST00000378125 ETNPPLQ8TBG4 499 aa21.39■■□□□ 1.01
PCDHA4-201ENST00000378125 NAP1L4Q99733 375 aaKnown RBP21.39■■□□□ 1.01
PCDHA4-201ENST00000378125 LRRC27Q9C0I9 530 aa21.39■■□□□ 1.01
PCDHA4-201ENST00000378125 BMP2KQ9NSY1 1161 aaPredicted RBP21.39■■□□□ 1.01
PCDHA4-201ENST00000378125 PUF60Q9UHX1 559 aaKnown RBP21.39■■□□□ 1.01
PCDHA4-201ENST00000378125 KDM3AQ9Y4C1 1321 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 CYP3A7-CYP3A51PA0A087WV96 503 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 EFCAB8A8MWE9 144 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 EPHB6O15197 1021 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 KRT18P05783 430 aaKnown RBP21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 DPEP1P16444 411 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 CYP3A7P24462 503 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 UBXN2AP68543 259 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 VWA3BQ502W6 1294 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 FAM26FQ5R3K3 315 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 CATSPER3Q86XQ3 398 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 MYOCDQ8IZQ8 938 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 OGFOD1Q8N543 542 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 NDST4Q9H3R1 872 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 ZNF446Q9NWS9 450 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 COL4A5P29400 1685 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 CFBP00751 764 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 ZNF76P36508 570 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 CYP4A11Q02928 519 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 HERC4Q5GLZ8 1057 aaPredicted RBP21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 POTEAQ6S8J7 498 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 CRYGNQ8WXF5 182 aa21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 GTPBP4Q9BZE4 634 aaKnown RBP21.38■■□□□ 1.01
PCDHA4-201ENST00000378125 CLCN6P51797 869 aa21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 STAT2P52630 851 aa21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 PABPC4Q13310 644 aaKnown RBP eCLIP21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 LENG9Q96B70 501 aa21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 TANGO6Q9C0B7 1094 aa21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 MMRN2Q9H8L6 949 aa21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 TRAF5O00463 557 aa21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 H2AFXP16104 143 aaPredicted RBP21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 HYIQ5T013 277 aa21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 LRRC55Q6ZSA7 311 aa21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 DEFB132Q7Z7B7 95 aa21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 SLFN12Q8IYM2 578 aa21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 ARHGEF10LQ9HCE6 1279 aa21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 HERC5Q9UII4 1024 aaKnown RBP21.37■■□□□ 1.01
PCDHA4-201ENST00000378125 PLEKP08567 350 aaPredicted RBP21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 CYP11B2P19099 503 aa21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 HERVK_113P62684 666 aa21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 SPIRE1Q08AE8 756 aa21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 PSMD2Q13200 908 aa21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 ARSHQ5FYA8 562 aa21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 MBOAT7Q96N66 472 aa21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 TSG101Q99816 390 aa21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 GLIS2Q9BZE0 524 aaPredicted RBP21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 NHEJ1Q9H9Q4 299 aaPredicted RBP21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 RGS17Q9UGC6 210 aaPredicted RBP21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 DDX41Q9UJV9 622 aaKnown RBP21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 HDAC9Q9UKV0 1011 aa21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 CNTNAP1P78357 1384 aa21.36■■□□□ 1.01
PCDHA4-201ENST00000378125 CTAGE9A4FU28 777 aa21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 MSH4O15457 936 aa21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 CYP27A1Q02318 531 aa21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 LRRC63Q05C16 580 aa21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 FAM151AQ8WW52 585 aa21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 NUP58Q9BVL2 599 aa21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 ZNHIT6Q9NWK9 470 aaKnown RBP21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 ZBTB21Q9ULJ3 1066 aa21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 VIL1P09327 827 aaKnown RBP21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 SREBF1P36956 1147 aa21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 ZBED6P86452 979 aa21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 ERGIC2Q96RQ1 377 aa21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 FEZ1Q99689 392 aa21.35■■□□□ 1.01
PCDHA4-201ENST00000378125 SHTN1A0MZ66 631 aa21.34■■□□□ 1.01
PCDHA4-201ENST00000378125 KCNA3P22001 575 aa21.34■■□□□ 1.01
PCDHA4-201ENST00000378125 MAN2A1Q16706 1144 aa21.34■■□□□ 1.01
PCDHA4-201ENST00000378125 BTNL9Q6UXG8 535 aa21.34■■□□□ 1.01
PCDHA4-201ENST00000378125 CCDC65Q8IXS2 484 aa21.34■■□□□ 1.01
PCDHA4-201ENST00000378125 RTKN2Q8IZC4 609 aa21.34■■□□□ 1.01
PCDHA4-201ENST00000378125 SMCR8Q8TEV9 937 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms