RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 ENOX1Q8TC92 643 aaKnown RBP19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 A6NNZ2 444 aa19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 KCNK3O14649 394 aa19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 CAMTA2O94983 1202 aa19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 TUBB8Q3ZCM7 444 aa19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 CEP95Q96GE4 821 aa19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 ZHX2Q9Y6X8 837 aa19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 MYO3AQ8NEV4 1616 aa19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 PSDA5PKW4 1024 aaPredicted RBP19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 CDC25BP30305 580 aa19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 CACNB1Q02641 598 aaPredicted RBP19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 MTERF2Q49AM1 385 aa19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 PDZD4Q76G19 769 aaPredicted RBP19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 CACTINQ8WUQ7 758 aaKnown RBP19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 EEF2KMTQ96G04 330 aa19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 DIP2AQ14689 1571 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 HSPA1LP34931 641 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 GRM4Q14833 912 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 SCYL2Q6P3W7 929 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 EEPD1Q7L9B9 569 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 RNF8O76064 485 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 TRIM50Q86XT4 487 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 GRK7Q8WTQ7 553 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 LY9Q9HBG7 655 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 PCDHA6Q9UN73 950 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 PCDHA8Q9Y5H6 950 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 PIK3C2BO00750 1634 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 USP17L10C9JJH3 530 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 ORC4O43929 436 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 MAP7D1Q3KQU3 841 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 GRAMD1CQ8IYS0 662 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 SLC44A5Q8NCS7 719 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 RSAD2Q8WXG1 361 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 HAUS1Q96CS2 278 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 DISC1Q9NRI5 854 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 HERC5Q9UII4 1024 aaKnown RBP19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 CASP14P31944 242 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 JAK3P52333 1124 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 ETF1P62495 437 aaKnown RBP19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 ELF2Q15723 593 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 SMYD4Q8IYR2 804 aaPredicted RBP19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 ABI1Q8IZP0 508 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 PAGE5Q96GU1 130 aa19.53■□□□□ 0.72
CLSTN1-202ENST00000377298 GABPB1Q06547 395 aaPredicted RBP19.52■□□□□ 0.72
CLSTN1-202ENST00000377298 BCL2L12Q9HB09 334 aa19.52■□□□□ 0.72
CLSTN1-202ENST00000377298 HPDP32754 393 aaPredicted RBP19.52■□□□□ 0.72
CLSTN1-202ENST00000377298 BIRC2Q13490 618 aa19.52■□□□□ 0.72
CLSTN1-202ENST00000377298 APOL6Q9BWW8 343 aa19.52■□□□□ 0.72
CLSTN1-202ENST00000377298 PPP1R2P3Q6NXS1 205 aa19.52■□□□□ 0.72
CLSTN1-202ENST00000377298 TBC1D31Q96DN5 1066 aa19.52■□□□□ 0.72
CLSTN1-202ENST00000377298 EPSTI1Q96J88 318 aa19.52■□□□□ 0.72
CLSTN1-202ENST00000377298 SPATA31A5Q5VU36 1347 aa19.52■□□□□ 0.71
CLSTN1-202ENST00000377298 SPATA31A7Q8IWB4 1347 aa19.52■□□□□ 0.71
CLSTN1-202ENST00000377298 SNAP25P60880 206 aa19.52■□□□□ 0.71
CLSTN1-202ENST00000377298 ORC2Q13416 577 aaPredicted RBP19.52■□□□□ 0.71
CLSTN1-202ENST00000377298 AFAP1L1Q8TED9 768 aa19.52■□□□□ 0.71
CLSTN1-202ENST00000377298 TRIM11Q96F44 468 aa19.52■□□□□ 0.71
CLSTN1-202ENST00000377298 KRIT1O00522 736 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 MNAT1P51948 309 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 SARNPP82979 210 aaKnown RBP19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 KMT5BQ4FZB7 885 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 PRR5LQ6MZQ0 368 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 CASC4Q6P4E1 433 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 NEDD1Q8NHV4 660 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 TBC1D16Q8TBP0 767 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 THAP9Q9H5L6 903 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 PCDHB4Q9Y5E5 795 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 ABCB11O95342 1321 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 GOLGA6BA6NDN3 693 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 PPANQ9NQ55 473 aaKnown RBP19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 PRKAG2Q9UGJ0 569 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 BUB1O43683 1085 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 CSF1RP07333 972 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 FDX1P10109 184 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 KIF11P52732 1056 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 PPP4R3CPQ6ZMV5 832 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 MRRFQ96E11 262 aaKnown RBP19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 VIMP08670 466 aaKnown RBP19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 PTPREP23469 700 aa19.51■□□□□ 0.71
CLSTN1-202ENST00000377298 GOLGA6CA6NDK9 693 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 GOLGA6DP0CG33 693 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 LRRC63Q05C16 580 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 SURF1Q15526 300 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 GIMAP8Q8ND71 665 aaPredicted RBP19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 RMDN3Q96TC7 470 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 GOLGA6AQ9NYA3 693 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 RNF181Q9P0P0 153 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 CLIC2O15247 247 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 STXBP2Q15833 593 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 C11orf57Q6ZUT1 292 aaPredicted RBP19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 CCT6BQ92526 530 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 TTLL3Q9Y4R7 772 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 NRXN1Q9ULB1 1477 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 CPS1P31327 1500 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 IFNB1P01574 187 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 SCARF1Q14162 830 aa19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 ZNF579Q8NAF0 562 aaKnown RBP19.5■□□□□ 0.71
CLSTN1-202ENST00000377298 BHMT2Q9H2M3 363 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms