RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 FCER1AP12319 257 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 VCAM1P19320 739 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 RPA1P27694 616 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 COPB1P53618 953 aaKnown RBP20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 FOXR2Q6PJQ5 311 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 POTEBQ6S5H4 581 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 SAMD3Q8N6K7 520 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 EMILIN3Q9NT22 766 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 KIAA1024Q9UPX6 916 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 SSC5DA1L4H1 1573 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 PTPRFP10586 1907 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 COBLO75128 1261 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 MED24O75448 989 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 STAT3P40763 770 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 MTMR2Q13614 643 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 ARHGAP27Q6ZUM4 889 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 TRIM47Q96LD4 638 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 DUSP9Q99956 384 aaKnown RBP20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 PPP1R9AQ9ULJ8 1098 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 R3HCC1Q9Y3T6 440 aaKnown RBP20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 RPTORQ8N122 1335 aa20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 PITPNM2Q9BZ72 1349 aa20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 PLA2G4BP0C869 781 aa20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 CENPPQ6IPU0 288 aa20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 DYMQ7RTS9 669 aa20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 MCF2L2Q86YR7 1114 aa20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 CCAR2Q8N163 923 aaKnown RBP20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 GUF1Q8N442 669 aaKnown RBP20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 TC2NQ8N9U0 490 aa20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 C12orf42Q96LP6 360 aa20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 AGBL1Q96MI9 1066 aa20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 POLR3CQ9BUI4 534 aaPredicted RBP20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 BMP2KQ9NSY1 1161 aaPredicted RBP20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 MAP3K20Q9NYL2 800 aaKnown RBP20.09■□□□□ 0.81
HLA-DQB1-201ENST00000374943 LOC285556D6RIA3 1793 aa20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 BACE1P56817 501 aa20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 SETQ01105 290 aaPredicted RBP20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 NCAPH2Q6IBW4 605 aa20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 CATSPER3Q86XQ3 398 aa20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 TMEM139Q8IV31 216 aa20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 CYP2W1Q8TAV3 490 aa20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 CLEC4DQ8WXI8 215 aa20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 SLC5A5Q92911 643 aa20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 PRIMPOLQ96LW4 560 aa20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 WRNIP1Q96S55 665 aa20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 TANGO6Q9C0B7 1094 aa20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 GGA3Q9NZ52 723 aa20.08■□□□□ 0.81
HLA-DQB1-201ENST00000374943 OTOFQ9HC10 1997 aa20.08■□□□□ 0.8
HLA-DQB1-201ENST00000374943 E9PMD0 336 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 SPATA31C1P0DKV0 1188 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 PTPRAP18433 802 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 PTPN21Q16825 1174 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 CEP55Q53EZ4 464 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 NOL9Q5SY16 702 aaKnown RBP20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 FAM114A1Q8IWE2 563 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 ZNF280CQ8ND82 737 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 SRRTQ9BXP5 876 aaKnown RBP20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 PICK1Q9NRD5 415 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 FRMPD4Q14CM0 1322 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 N4BP3O15049 544 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 PSMD10O75832 226 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 FLOT1O75955 427 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 HIRAP54198 1017 aaPredicted RBP20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 SLC12A3P55017 1021 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 COASYQ13057 564 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 SPP2Q13103 211 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 PPP2R5CQ13362 524 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 E4F1Q66K89 784 aaPredicted RBP20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 ANKRD40Q6AI12 368 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 SAMD1Q6SPF0 538 aaPredicted RBP20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 CSGALNACT2Q8N6G5 542 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 RPAP3Q9H6T3 665 aaPredicted RBP20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 SLC39A2Q9NP94 309 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 TAB2Q9NYJ8 693 aa20.07■□□□□ 0.8
HLA-DQB1-201ENST00000374943 FRMD3A2A2Y4 597 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 POTEFA5A3E0 1075 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 MEIS1O00470 390 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 POTEIP0CG38 1075 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 IDEP14735 1019 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 CYP11B2P19099 503 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 POTEGQ6S5H5 508 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 POTEEQ6S8J3 1075 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 NYAP1Q6ZVC0 841 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 KLRG1Q96E93 195 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 PANX2Q96RD6 677 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 UIMC1Q96RL1 719 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 SEMA6BQ9H3T3 888 aa20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 MAGEC2Q9UBF1 373 aaPredicted RBP20.06■□□□□ 0.8
HLA-DQB1-201ENST00000374943 USP27XA6NNY8 438 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 LGALS16A8MUM7 142 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 AKR1B15C9JRZ8 316 aaPredicted RBP20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 ARHGAP6O43182 974 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 CCP110O43303 1012 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 STX10O60499 249 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 MUTP22033 750 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 EPS15P42566 896 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 LRRC63Q05C16 580 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 DGKZQ13574 1117 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 TRIM14Q14142 442 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 OTOP1Q7RTM1 612 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms