RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 ARHGAP29Q52LW3 1261 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 UNC13DQ70J99 1090 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 TEX2Q8IWB9 1127 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 TANGO6Q9C0B7 1094 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 LUC7L2Q9Y383 392 aaKnown RBP20.35■□□□□ 0.85
RXRB-202ENST00000374685 CHRM1P11229 460 aaPredicted RBP20.34■□□□□ 0.85
RXRB-202ENST00000374685 EEF1GP26641 437 aaKnown RBP20.34■□□□□ 0.85
RXRB-202ENST00000374685 PABPC4Q13310 644 aaKnown RBP eCLIP20.34■□□□□ 0.857e-9■■■□□ 15.2
RXRB-202ENST00000374685 MAPK8IP2Q13387 824 aaPredicted RBP20.34■□□□□ 0.85
RXRB-202ENST00000374685 DGKZQ13574 1117 aa20.34■□□□□ 0.85
RXRB-202ENST00000374685 GPBP1Q86WP2 473 aa20.34■□□□□ 0.85
RXRB-202ENST00000374685 NIM1KQ8IY84 436 aa20.34■□□□□ 0.85
RXRB-202ENST00000374685 ARHGEF10LQ9HCE6 1279 aa20.34■□□□□ 0.85
RXRB-202ENST00000374685 MED24O75448 989 aa20.34■□□□□ 0.85
RXRB-202ENST00000374685 RTKN2Q8IZC4 609 aa20.34■□□□□ 0.85
RXRB-202ENST00000374685 ERO1AQ96HE7 468 aa20.34■□□□□ 0.85
RXRB-202ENST00000374685 PSMC6P62333 389 aa20.33■□□□□ 0.85
RXRB-202ENST00000374685 ZNF569Q5MCW4 686 aa20.33■□□□□ 0.85
RXRB-202ENST00000374685 FAM207AQ9NSI2 230 aaPredicted RBP20.33■□□□□ 0.85
RXRB-202ENST00000374685 PANK4Q9NVE7 773 aa20.33■□□□□ 0.85
RXRB-202ENST00000374685 TRIM10Q9UDY6 481 aa20.33■□□□□ 0.85
RXRB-202ENST00000374685 ZBTB21Q9ULJ3 1066 aa20.33■□□□□ 0.85
RXRB-202ENST00000374685 TFRCP02786 760 aaKnown RBP20.33■□□□□ 0.84
RXRB-202ENST00000374685 PLA2G4BP0C869 781 aa20.33■□□□□ 0.84
RXRB-202ENST00000374685 GCFC2P16383 781 aaKnown RBP20.33■□□□□ 0.84
RXRB-202ENST00000374685 KCNA3P22001 575 aa20.33■□□□□ 0.84
RXRB-202ENST00000374685 ORC2Q13416 577 aaPredicted RBP20.33■□□□□ 0.84
RXRB-202ENST00000374685 TSR1Q2NL82 804 aaKnown RBP20.33■□□□□ 0.84
RXRB-202ENST00000374685 HERC4Q5GLZ8 1057 aaPredicted RBP20.33■□□□□ 0.84
RXRB-202ENST00000374685 CCDC155Q8N6L0 562 aa20.33■□□□□ 0.84
RXRB-202ENST00000374685 ERICH4A6NGS2 130 aa20.32■□□□□ 0.84
RXRB-202ENST00000374685 COASYQ13057 564 aa20.32■□□□□ 0.84
RXRB-202ENST00000374685 TRMT1LQ7Z2T5 733 aaKnown RBP20.32■□□□□ 0.84
RXRB-202ENST00000374685 GMCL1P1Q8NEA9 526 aa20.32■□□□□ 0.84
RXRB-202ENST00000374685 GMCL1Q96IK5 515 aa20.32■□□□□ 0.84
RXRB-202ENST00000374685 PKD2L1Q9P0L9 805 aa20.32■□□□□ 0.84
RXRB-202ENST00000374685 PHLPP2Q6ZVD8 1323 aa20.32■□□□□ 0.84
RXRB-202ENST00000374685 EGFRP00533 1210 aa20.32■□□□□ 0.84
RXRB-202ENST00000374685 BMP2KQ9NSY1 1161 aaPredicted RBP20.32■□□□□ 0.84
RXRB-202ENST00000374685 FEZ2Q9UHY8 353 aaPredicted RBP20.32■□□□□ 0.84
RXRB-202ENST00000374685 ITIH6Q6UXX5 1313 aa20.32■□□□□ 0.84
RXRB-202ENST00000374685 OPLAHO14841 1288 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 BAG6P46379 1132 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 CXCL9Q07325 125 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 TMEM119Q4V9L6 283 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 COL4A5P29400 1685 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 VIL1P09327 827 aaKnown RBP20.31■□□□□ 0.84
RXRB-202ENST00000374685 CYP2C19P33261 490 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 CYP26C1Q6V0L0 522 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 FAM151AQ8WW52 585 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 BCAS3Q9H6U6 928 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 MMRN2Q9H8L6 949 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 L2HGDHQ9H9P8 463 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 TRAF5O00463 557 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 DNM2P50570 870 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 ZNF507Q8TCN5 953 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 NAA15Q9BXJ9 866 aaKnown RBP20.31■□□□□ 0.84
RXRB-202ENST00000374685 RGL1Q9NZL6 768 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 HERC5Q9UII4 1024 aaKnown RBP20.31■□□□□ 0.84
RXRB-202ENST00000374685 GUCA1BQ9UMX6 200 aa20.31■□□□□ 0.84
RXRB-202ENST00000374685 TNS1Q9HBL0 1735 aaKnown RBP20.3■□□□□ 0.84
RXRB-202ENST00000374685 ATRNL1Q5VV63 1379 aa20.3■□□□□ 0.84
RXRB-202ENST00000374685 TULP1O00294 542 aaPredicted RBP20.3■□□□□ 0.84
RXRB-202ENST00000374685 KIF5CO60282 957 aa20.3■□□□□ 0.84
RXRB-202ENST00000374685 FAM26FQ5R3K3 315 aa20.3■□□□□ 0.84
RXRB-202ENST00000374685 CATSPER3Q86XQ3 398 aa20.3■□□□□ 0.84
RXRB-202ENST00000374685 TMTC1Q8IUR5 882 aa20.3■□□□□ 0.84
RXRB-202ENST00000374685 OR8K1Q8NGG5 319 aa20.3■□□□□ 0.84
RXRB-202ENST00000374685 ZBTB9Q96C00 473 aa20.3■□□□□ 0.84
RXRB-202ENST00000374685 USP11P51784 963 aa20.3■□□□□ 0.84
RXRB-202ENST00000374685 FBXO38Q6PIJ6 1188 aa20.3■□□□□ 0.84
RXRB-202ENST00000374685 DNAJC19Q96DA6 116 aa20.3■□□□□ 0.84
RXRB-202ENST00000374685 KCNMB3Q9NPA1 279 aa20.3■□□□□ 0.84
RXRB-202ENST00000374685 HOMER2Q9NSB8 354 aa20.3■□□□□ 0.84
RXRB-202ENST00000374685 CNTNAP1P78357 1384 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 GOLGA6L9A6NEM1 432 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 FKBP15Q5T1M5 1219 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 CPXCR1Q8N123 301 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 GOPCQ9HD26 462 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 ZNRF3Q9ULT6 936 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 SPDYE2Q495Y8 402 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 MIIPQ5JXC2 388 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 TEX35Q5T0J7 233 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 CENPPQ6IPU0 288 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 FAM114A1Q8IWE2 563 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 MYOCDQ8IZQ8 938 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 SMCR8Q8TEV9 937 aaPredicted RBP20.29■□□□□ 0.84
RXRB-202ENST00000374685 UBXN4Q92575 508 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 GMLQ99445 158 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 GLT8D2Q9H1C3 349 aa20.29■□□□□ 0.84
RXRB-202ENST00000374685 PVALEFA0A1B0GWK0 134 aa20.28■□□□□ 0.84
RXRB-202ENST00000374685 SFI1A8K8P3 1242 aa20.28■□□□□ 0.84
RXRB-202ENST00000374685 WNT10BO00744 389 aa20.28■□□□□ 0.84
RXRB-202ENST00000374685 MSH4O15457 936 aa20.28■□□□□ 0.84
RXRB-202ENST00000374685 AP3B2Q13367 1082 aa20.28■□□□□ 0.84
RXRB-202ENST00000374685 KIF4BQ2VIQ3 1234 aa20.28■□□□□ 0.84
RXRB-202ENST00000374685 PIGOQ8TEQ8 1089 aa20.28■□□□□ 0.84
RXRB-202ENST00000374685 NT5C3AQ9H0P0 336 aa20.28■□□□□ 0.84
RXRB-202ENST00000374685 EFCC1Q9HA90 598 aa20.28■□□□□ 0.84
RXRB-202ENST00000374685 PUF60Q9UHX1 559 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms