RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 EDEM3Q9BZQ6 932 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 ANKZF1Q9H8Y5 726 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 BLOC1S4Q9NUP1 217 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 SERPINB13Q9UIV8 391 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 PASKQ96RG2 1323 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 CNTNAP1P78357 1384 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 PSME4Q14997 1843 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 CCDC66A2RUB6 948 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 EIF3JO75822 258 aaKnown RBP15.5■□□□□ 0.07
HMGCL-203ENST00000374490 EPHX2P34913 555 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 HERVK_113P62684 666 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 MAN2A1Q16706 1144 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 VWA3BQ502W6 1294 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 MIIPQ5JXC2 388 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 DACT2Q5SW24 774 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 PAPD7Q5XG87 772 aaKnown RBP15.5■□□□□ 0.07
HMGCL-203ENST00000374490 MCTP2Q6DN12 878 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 HDXQ7Z353 690 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 TRAPPC11Q7Z392 1133 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 CCDC84Q86UT8 332 aaPredicted RBP15.5■□□□□ 0.07
HMGCL-203ENST00000374490 KIAA0895Q8NCT3 520 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 SNX29Q8TEQ0 813 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 EHD4Q9H223 541 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 GUCA1BQ9UMX6 200 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 MYMKA6NI61 221 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 TMEM88BA6NKF7 163 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 FZD9O00144 591 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 MAP2K7O14733 419 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 FCER1AP12319 257 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 CRKP46108 304 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 CLK2P49760 499 aaKnown RBP15.49■□□□□ 0.07
HMGCL-203ENST00000374490 MCM6Q14566 821 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 SMC1AQ14683 1233 aaKnown RBP15.49■□□□□ 0.07
HMGCL-203ENST00000374490 KIAA0825Q8IV33 1275 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 LRRC47Q8N1G4 583 aaKnown RBP15.49■□□□□ 0.07
HMGCL-203ENST00000374490 COA7Q96BR5 231 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 MTMR8Q96EF0 704 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 NT5C3AQ9H0P0 336 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 EPC1Q9H2F5 836 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 SEMA6BQ9H3T3 888 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 NHEJ1Q9H9Q4 299 aaPredicted RBP15.49■□□□□ 0.07
HMGCL-203ENST00000374490 JMJD4Q9H9V9 463 aa15.49■□□□□ 0.07
HMGCL-203ENST00000374490 SLC37A4O43826 429 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 TDP2O95551 362 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 TNNI2P48788 182 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 HDLBPQ00341 1268 aaKnown RBP15.48■□□□□ 0.07
HMGCL-203ENST00000374490 PICALMQ13492 652 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 SPA17Q15506 151 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 HYIQ5T013 277 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 IQCEQ6IPM2 695 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 GPC2Q8N158 579 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 LARGE2Q8N3Y3 721 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 PURBQ96QR8 312 aaKnown RBP15.48■□□□□ 0.07
HMGCL-203ENST00000374490 ACBD3Q9H3P7 528 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 ZSWIM4Q9H7M6 989 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 GPCPD1Q9NPB8 672 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 KCNQ5Q9NR82 932 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 USP40Q9NVE5 1235 aa15.48■□□□□ 0.07
HMGCL-203ENST00000374490 ZHX1Q9UKY1 873 aaPredicted RBP15.48■□□□□ 0.07
HMGCL-203ENST00000374490 RASSF10A6NK89 507 aa15.47■□□□□ 0.07
HMGCL-203ENST00000374490 ZBTB5O15062 677 aa15.47■□□□□ 0.07
HMGCL-203ENST00000374490 USO1O60763 962 aaKnown RBP15.47■□□□□ 0.07
HMGCL-203ENST00000374490 SASH3O75995 380 aa15.47■□□□□ 0.07
HMGCL-203ENST00000374490 OAS2P29728 719 aaKnown RBP15.47■□□□□ 0.07
HMGCL-203ENST00000374490 VAV2P52735 878 aa15.47■□□□□ 0.07
HMGCL-203ENST00000374490 RBM5P52756 815 aaKnown RBP eCLIP15.47■□□□□ 0.07
HMGCL-203ENST00000374490 EIF6P56537 245 aaKnown RBP15.47■□□□□ 0.07
HMGCL-203ENST00000374490 BEND6Q5SZJ8 279 aaPredicted RBP15.47■□□□□ 0.07
HMGCL-203ENST00000374490 WDR93Q6P2C0 686 aa15.47■□□□□ 0.07
HMGCL-203ENST00000374490 ADGRF4Q8IZF3 695 aa15.47■□□□□ 0.07
HMGCL-203ENST00000374490 MRIQ9BWK5 157 aa15.47■□□□□ 0.07
HMGCL-203ENST00000374490 VPS33BQ9H267 617 aa15.47■□□□□ 0.07
HMGCL-203ENST00000374490 NDST4Q9H3R1 872 aa15.47■□□□□ 0.07
HMGCL-203ENST00000374490 SLC39A2Q9NP94 309 aa15.47■□□□□ 0.07
HMGCL-203ENST00000374490 BMP2KQ9NSY1 1161 aaPredicted RBP15.47■□□□□ 0.07
HMGCL-203ENST00000374490 DDX25Q9UHL0 483 aaKnown RBP15.47■□□□□ 0.07
HMGCL-203ENST00000374490 SAR1BQ9Y6B6 198 aa15.47■□□□□ 0.07
HMGCL-203ENST00000374490 MARCH6O60337 910 aa15.46■□□□□ 0.07
HMGCL-203ENST00000374490 ITGBL1O95965 494 aaPredicted RBP15.46■□□□□ 0.07
HMGCL-203ENST00000374490 EHHADHQ08426 723 aa15.46■□□□□ 0.07
HMGCL-203ENST00000374490 KIF5AQ12840 1032 aa15.46■□□□□ 0.07
HMGCL-203ENST00000374490 CCDC96Q2M329 555 aa15.46■□□□□ 0.07
HMGCL-203ENST00000374490 CCDC42Q96M95 316 aa15.46■□□□□ 0.07
HMGCL-203ENST00000374490 ZDHHC15Q96MV8 337 aa15.46■□□□□ 0.07
HMGCL-203ENST00000374490 NUCKS1Q9H1E3 243 aaKnown RBP15.46■□□□□ 0.07
HMGCL-203ENST00000374490 AGPAT5Q9NUQ2 364 aa15.46■□□□□ 0.07
HMGCL-203ENST00000374490 SIK3Q9Y2K2 1263 aa15.46■□□□□ 0.07
HMGCL-203ENST00000374490 STK24Q9Y6E0 443 aa15.46■□□□□ 0.07
HMGCL-203ENST00000374490 MYH8P13535 1937 aa15.46■□□□□ 0.07
HMGCL-203ENST00000374490 GNA14O95837 355 aa15.46■□□□□ 0.06
HMGCL-203ENST00000374490 ABL1P00519 1130 aa15.46■□□□□ 0.06
HMGCL-203ENST00000374490 CYP2C19P33261 490 aa15.46■□□□□ 0.06
HMGCL-203ENST00000374490 SHMT1P34896 483 aa15.46■□□□□ 0.06
HMGCL-203ENST00000374490 MAP9Q49MG5 647 aa15.46■□□□□ 0.06
HMGCL-203ENST00000374490 CDC42EP5Q6NZY7 148 aa15.46■□□□□ 0.06
HMGCL-203ENST00000374490 MOXD1Q6UVY6 613 aa15.46■□□□□ 0.06
HMGCL-203ENST00000374490 MYOCDQ8IZQ8 938 aa15.46■□□□□ 0.06
HMGCL-203ENST00000374490 DCAF4Q8WV16 495 aa15.46■□□□□ 0.06
HMGCL-203ENST00000374490 DDX12PQ92771 950 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms