RNA–Protein interactions for RNA: ENST00000372633.1

RAB40A-202, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB40A, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-202ENST00000372633 CCDC87Q9NVE4 849 aa15.12■□□□□ 0.01
RAB40A-202ENST00000372633 MINPP1Q9UNW1 487 aa15.12■□□□□ 0.01
RAB40A-202ENST00000372633 NIP7Q9Y221 180 aaKnown RBP eCLIP15.12■□□□□ 0.01
RAB40A-202ENST00000372633 ROBO3Q96MS0 1386 aa15.12■□□□□ 0.01
RAB40A-202ENST00000372633 LOC102724159A0A0B4J2E5 919 aa15.12■□□□□ 0.01
RAB40A-202ENST00000372633 PWP2Q15269 919 aaKnown RBP15.12■□□□□ 0.01
RAB40A-202ENST00000372633 LETM2Q2VYF4 491 aa15.12■□□□□ 0.01
RAB40A-202ENST00000372633 C12orf60Q5U649 245 aa15.12■□□□□ 0.01
RAB40A-202ENST00000372633 CACNA2D4Q7Z3S7 1137 aa15.12■□□□□ 0.01
RAB40A-202ENST00000372633 NEK8Q86SG6 692 aa15.12■□□□□ 0.01
RAB40A-202ENST00000372633 PROM2Q8N271 834 aa15.12■□□□□ 0.01
RAB40A-202ENST00000372633 TMBIM4Q9HC24 238 aa15.12■□□□□ 0.01
RAB40A-202ENST00000372633 RIC8AQ9NPQ8 531 aa15.12■□□□□ 0.01
RAB40A-202ENST00000372633 BHMG1C9JSJ3 638 aaPredicted RBP15.11■□□□□ 0.01
RAB40A-202ENST00000372633 ACTN3Q08043 901 aaPredicted RBP15.11■□□□□ 0.01
RAB40A-202ENST00000372633 DRP2Q13474 957 aa15.11■□□□□ 0.01
RAB40A-202ENST00000372633 SF3B3Q15393 1217 aaKnown RBP15.11■□□□□ 0.01
RAB40A-202ENST00000372633 C3orf20Q8ND61 904 aa15.11■□□□□ 0.01
RAB40A-202ENST00000372633 KRT12Q99456 494 aa15.11■□□□□ 0.01
RAB40A-202ENST00000372633 SPZ1Q9BXG8 430 aa15.11■□□□□ 0.01
RAB40A-202ENST00000372633 VCPKMTQ9H867 229 aa15.11■□□□□ 0.01
RAB40A-202ENST00000372633 LUC7LQ9NQ29 371 aaKnown RBP15.11■□□□□ 0.01
RAB40A-202ENST00000372633 PSMD2Q13200 908 aa15.11■□□□□ 0.01
RAB40A-202ENST00000372633 PNMA5Q96PV4 448 aa15.11■□□□□ 0.01
RAB40A-202ENST00000372633 MTMR9Q96QG7 549 aa15.11■□□□□ 0.01
RAB40A-202ENST00000372633 USP17L8P0C7I0 530 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 GUCY2FP51841 1108 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 SMTNP53814 917 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 SLC18A3Q16572 532 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 USP38Q8NB14 1042 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 ISCUQ9H1K1 167 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 MCM9Q9NXL9 1143 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 ATP6V0A2Q9Y487 856 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 H0YGN5 161 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 KLRC1P26715 233 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 ECHS1P30084 290 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 FXR2P51116 673 aaKnown RBP eCLIP15.1■□□□□ 0.01
RAB40A-202ENST00000372633 ATP2B2Q01814 1243 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 ZCWPW2Q504Y3 356 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 SFMBT2Q5VUG0 894 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 TMC4Q7Z404 712 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 LARP4BQ92615 738 aaKnown RBP15.1■□□□□ 0.01
RAB40A-202ENST00000372633 TAF1DQ9H5J8 278 aaPredicted RBP15.1■□□□□ 0.01
RAB40A-202ENST00000372633 NFS1Q9Y697 457 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 MYH14Q7Z406 1995 aaKnown RBP15.1■□□□□ 0.01
RAB40A-202ENST00000372633 BTNL10A8MVZ5 291 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 H0YHG0 523 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 RAD51CO43502 376 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 RASSF9O75901 435 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 SEC24CP53992 1094 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 HDLBPQ00341 1268 aaKnown RBP15.1■□□□□ 0.01
RAB40A-202ENST00000372633 TRADDQ15628 312 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 FAM83BQ5T0W9 1011 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 PLAAQ9Y263 795 aa15.1■□□□□ 0.01
RAB40A-202ENST00000372633 FTCDO95954 541 aa15.09■□□□□ 0.01
RAB40A-202ENST00000372633 GNA11P29992 359 aa15.09■□□□□ 0.01
RAB40A-202ENST00000372633 MAP2K2P36507 400 aa15.09■□□□□ 0.01
RAB40A-202ENST00000372633 SETQ01105 290 aaPredicted RBP15.09■□□□□ 0.01
RAB40A-202ENST00000372633 TDRD12Q587J7 1177 aaKnown RBP15.09■□□□□ 0.01
RAB40A-202ENST00000372633 ARFGAP2Q8N6H7 521 aa15.09■□□□□ 0.01
RAB40A-202ENST00000372633 TACO1Q9BSH4 297 aaKnown RBP15.09■□□□□ 0.01
RAB40A-202ENST00000372633 PRDX5P30044 214 aa15.09■□□□□ 0.01
RAB40A-202ENST00000372633 CRKLP46109 303 aaKnown RBP15.09■□□□□ 0.01
RAB40A-202ENST00000372633 TNNC1P63316 161 aa15.09■□□□□ 0.01
RAB40A-202ENST00000372633 POLD4Q9HCU8 107 aa15.09■□□□□ 0.01
RAB40A-202ENST00000372633 C6orf50Q9HD87 102 aa15.09■□□□□ 0.01
RAB40A-202ENST00000372633 MYH4Q9Y623 1939 aa15.08■□□□□ 0.01
RAB40A-202ENST00000372633 USP17L3A6NCW0 530 aa15.08■□□□□ 0.01
RAB40A-202ENST00000372633 USP17L4A6NCW7 530 aa15.08■□□□□ 0.01
RAB40A-202ENST00000372633 SMCO2A6NFE2 343 aa15.08■□□□□ 0.01
RAB40A-202ENST00000372633 NAPAP54920 295 aa15.08■□□□□ 0.01
RAB40A-202ENST00000372633 USP17L1Q7RTZ2 530 aa15.08■□□□□ 0.01
RAB40A-202ENST00000372633 GPIHBP1Q8IV16 184 aa15.08■□□□□ 0.01
RAB40A-202ENST00000372633 TMEM47Q9BQJ4 181 aa15.08■□□□□ 0.01
RAB40A-202ENST00000372633 CXorf56Q9H5V9 222 aa15.08■□□□□ 0.01
RAB40A-202ENST00000372633 AIPL1Q9NZN9 384 aa15.08■□□□□ 0.01
RAB40A-202ENST00000372633 SLC12A6Q9UHW9 1150 aa15.08■□□□□ 0.01
RAB40A-202ENST00000372633 CUL1Q13616 776 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 CEP85LQ5SZL2 805 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 C3orf67Q6ZVT6 689 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 CCDC13Q8IYE1 715 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 SCFD2Q8WU76 684 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 RAD54LQ92698 747 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 TSG101Q99816 390 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 NLRC4Q9NPP4 1024 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 COL4A3BPQ9Y5P4 624 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 DOT1LQ8TEK3 1739 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 KLRF2D3W0D1 207 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 CHUKO15111 745 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 MARSP56192 900 aaKnown RBP15.08■□□□□ 0
RAB40A-202ENST00000372633 FKBP3Q00688 224 aaKnown RBP15.08■□□□□ 0
RAB40A-202ENST00000372633 DYMQ7RTS9 669 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 TBCKQ8TEA7 893 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 CYFIP2Q96F07 1278 aa15.08■□□□□ 0
RAB40A-202ENST00000372633 KLRK1P26718 216 aa15.07■□□□□ 0
RAB40A-202ENST00000372633 SMARCA1P28370 1054 aa15.07■□□□□ 0
RAB40A-202ENST00000372633 HSD17B3P37058 310 aa15.07■□□□□ 0
RAB40A-202ENST00000372633 ERVK-9P63128 1117 aa15.07■□□□□ 0
RAB40A-202ENST00000372633 PDIA5Q14554 519 aa15.07■□□□□ 0
RAB40A-202ENST00000372633 TBC1D5Q92609 795 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms