RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 TTLL1O95922 423 aa25.99■■□□□ 1.75
RAPGEF1-203ENST00000372195 MYCBPQ99417 103 aaPredicted RBP25.99■■□□□ 1.75
RAPGEF1-203ENST00000372195 GOLGA8IPA6NC78 632 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 GOLGA8JA6NMD2 632 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 IKBKBO14920 756 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 ACTN1P12814 892 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 NNTQ13423 1086 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 G3BP2Q9UN86 482 aaKnown RBP25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 MX2P20592 715 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 DHX9Q08211 1270 aaKnown RBP25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 HACE1Q8IYU2 909 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 SCYL3Q8IZE3 742 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 THOC1Q96FV9 657 aaKnown RBP25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 SUN1O94901 812 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 MAN2A1Q16706 1144 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 AMNQ9BXJ7 453 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 RWDD2AQ9UIY3 292 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 ABCC2Q92887 1545 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 PALM3A6NDB9 673 aaPredicted RBP25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 GARSP41250 739 aaKnown RBP25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 TOGARAM2Q6ZUX3 1019 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 RPAINQ86UA6 219 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 HAUS2Q9NVX0 235 aa25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 PIH1D3Q9NQM4 214 aaKnown RBP25.98■■□□□ 1.75
RAPGEF1-203ENST00000372195 VSTM4Q8IW00 320 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 BCAP29Q9UHQ4 241 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 WDR46O15213 610 aaKnown RBP25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 LOC102724428A0A0B4J2F2 783 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 PLEKHA8P1O95397 391 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 CD58P19256 250 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 HOXA13P31271 388 aaPredicted RBP25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 SIK1P57059 783 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 KRT26Q7Z3Y9 468 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 CCNYQ8ND76 341 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 PPME1Q9Y570 386 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 SRGAP2O75044 1071 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 RASIP1Q5U651 963 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 SCARA5Q6ZMJ2 495 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 TRIM4Q9C037 500 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 ABCB6Q9NP58 842 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 NOVA2Q9UNW9 492 aaKnown RBP25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 NRBP2Q9NSY0 501 aa25.97■■□□□ 1.75
RAPGEF1-203ENST00000372195 SART1O43290 800 aaKnown RBP25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 OSBPL3Q9H4L5 887 aa25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 SPECC1L-ADORA2AF8WAN1 911 aa25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 EEPD1Q7L9B9 569 aa25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 SPATS2Q86XZ4 545 aaKnown RBP25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 TLR3O15455 904 aaKnown RBP25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 KRT3P12035 628 aa25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 POLR2BP30876 1174 aaKnown RBP25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 BASP1P80723 227 aaKnown RBP25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 LRGUKQ96M69 825 aa25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 KCNG1Q9UIX4 513 aa25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 ANKRD65E5RJM6 399 aa25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 BBOF1Q8ND07 529 aa25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 CTTNQ14247 550 aaKnown RBP25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 FNDC3AQ9Y2H6 1198 aaKnown RBP25.96■■□□□ 1.75
RAPGEF1-203ENST00000372195 INSRP06213 1382 aa25.95■■□□□ 1.75
RAPGEF1-203ENST00000372195 ACCSQ96QU6 501 aa25.95■■□□□ 1.75
RAPGEF1-203ENST00000372195 ECEL1O95672 775 aa25.95■■□□□ 1.74
RAPGEF1-203ENST00000372195 MRPL46Q9H2W6 279 aaKnown RBP25.95■■□□□ 1.74
RAPGEF1-203ENST00000372195 NXF1Q9UBU9 619 aaKnown RBP25.95■■□□□ 1.74
RAPGEF1-203ENST00000372195 PGRMC1O00264 195 aaKnown RBP25.95■■□□□ 1.74
RAPGEF1-203ENST00000372195 LAD1O00515 517 aa25.95■■□□□ 1.74
RAPGEF1-203ENST00000372195 SLFN14P0C7P3 912 aa25.95■■□□□ 1.74
RAPGEF1-203ENST00000372195 ASPRV1Q53RT3 343 aa25.95■■□□□ 1.74
RAPGEF1-203ENST00000372195 MAP3K21Q5TCX8 1036 aa25.95■■□□□ 1.74
RAPGEF1-203ENST00000372195 NOP9Q86U38 636 aaKnown RBP25.95■■□□□ 1.74
RAPGEF1-203ENST00000372195 ARHGAP4P98171 946 aa25.95■■□□□ 1.74
RAPGEF1-203ENST00000372195 DACT3Q96B18 629 aaPredicted RBP25.95■■□□□ 1.74
RAPGEF1-203ENST00000372195 ANKRD36BP1Q96IX9 119 aa25.95■■□□□ 1.74
RAPGEF1-203ENST00000372195 FOXD4Q12950 439 aaPredicted RBP25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 CUL4AQ13619 759 aa25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 FAM160B1Q5W0V3 765 aa25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 RSPH3Q86UC2 560 aa25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 MIGA2Q7L4E1 593 aa25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 FAM193BQ96PV7 902 aaPredicted RBP25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 CTNND1O60716 968 aaKnown RBP25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 ASPHQ12797 758 aa25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 PLCB4Q15147 1175 aa25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 CXorf38Q8TB03 319 aa25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 CDKL2Q92772 493 aa25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 RCOR1Q9UKL0 485 aa25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 NDUFA10O95299 355 aa25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 TFAMQ00059 246 aaKnown RBP25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 DARS2Q6PI48 645 aaKnown RBP25.94■■□□□ 1.74
RAPGEF1-203ENST00000372195 TNFAIP1Q13829 316 aa25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 KCTD6Q8NC69 237 aa25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 INO80B-WBP1J3KQ70 363 aa25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 MSH2P43246 934 aa25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 PRPSAP1Q14558 356 aa25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 MCTP2Q6DN12 878 aa25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 EP400NLQ6ZTU2 488 aa25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 INO80BQ9C086 356 aaPredicted RBP25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 CCDC68Q9H2F9 335 aa25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 MAGEF1Q9HAY2 307 aa25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 XDHP47989 1333 aa25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 CPP00450 1065 aa25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 PDZD4Q76G19 769 aaPredicted RBP25.93■■□□□ 1.74
RAPGEF1-203ENST00000372195 C7orf31Q8N865 590 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms