RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 LIMA1Q9UHB6 759 aaKnown RBP12.81□□□□□ -0.36
PTPN1-201ENST00000371621 SART1O43290 800 aaKnown RBP12.81□□□□□ -0.36
PTPN1-201ENST00000371621 TMEM266Q2M3C6 531 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 MFN1Q8IWA4 741 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 ITFG2Q969R8 447 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 NMD3Q96D46 503 aaKnown RBP12.81□□□□□ -0.36
PTPN1-201ENST00000371621 BICD1Q96G01 975 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 ANLNQ9NQW6 1124 aa12.81□□□□□ -0.36
PTPN1-201ENST00000371621 GTPBP6O43824 516 aaPredicted RBP12.8□□□□□ -0.36
PTPN1-201ENST00000371621 FGGP02679 453 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 PTPREP23469 700 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 HSPA1LP34931 641 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 TRIP13Q15645 432 aaPredicted RBP12.8□□□□□ -0.36
PTPN1-201ENST00000371621 GRAMD1BQ3KR37 738 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 SPATA21Q7Z572 469 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 LRRC59Q96AG4 307 aaKnown RBP12.8□□□□□ -0.36
PTPN1-201ENST00000371621 ERP27Q96DN0 273 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 A0A0G2JND7 137 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 GYG2O15488 501 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 FAM200BP0CF97 657 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 QPCTQ16769 361 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 PROSER3Q2NL68 480 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 SEL1L2Q5TEA6 688 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 OPTNQ96CV9 577 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 TROVE2P10155 538 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTPN1-201ENST00000371621 TATP17735 454 aaPredicted RBP12.8□□□□□ -0.36
PTPN1-201ENST00000371621 MX2P20592 715 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 TXKP42681 527 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 LRRC41Q15345 812 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 KIF6Q6ZMV9 814 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 ESR2Q92731 530 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 DDX50Q9BQ39 737 aaKnown RBP12.8□□□□□ -0.36
PTPN1-201ENST00000371621 UBXN6Q9BZV1 441 aa12.8□□□□□ -0.36
PTPN1-201ENST00000371621 A1CFQ9NQ94 594 aaKnown RBP12.8□□□□□ -0.36
PTPN1-201ENST00000371621 USP15Q9Y4E8 981 aaPredicted RBP12.8□□□□□ -0.36
PTPN1-201ENST00000371621 KLHL33A6NCF5 533 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 UBE2Q2LH0YL09 131 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 STAMBPO95630 424 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 ETS2P15036 469 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 SLC1A4P43007 532 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 POLA2Q14181 598 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 PI16Q6UXB8 463 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 KCNB2Q92953 911 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 TMEM87BQ96K49 555 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 OSBPL7Q9BZF2 842 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 RWDD2AQ9UIY3 292 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 TSC22D4Q9Y3Q8 395 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 LRRC53A6NM62 1247 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 AGPSO00116 658 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 MBD4O95243 580 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 TARSP26639 723 aaKnown RBP12.79□□□□□ -0.36
PTPN1-201ENST00000371621 RNF220Q5VTB9 566 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 TMTC2Q8N394 836 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 OXER1Q8TDS5 423 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 APPBP2Q92624 585 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 OSBP2Q969R2 916 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 TGS1Q96RS0 853 aaKnown RBP12.79□□□□□ -0.36
PTPN1-201ENST00000371621 CELF4Q9BZC1 486 aaKnown RBP12.79□□□□□ -0.36
PTPN1-201ENST00000371621 VPS37BQ9H9H4 285 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 ANAPC4Q9UJX5 808 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 MAST3O60307 1309 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 CFAP69A5D8W1 941 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 ZNF233A6NK53 670 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 CETN2P41208 172 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 IL9RQ01113 521 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 CUL1Q13616 776 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 MAGEB6Q8N7X4 407 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 JDP2Q8WYK2 163 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 CUEDC2Q9H467 287 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 MKNK2Q9HBH9 465 aa12.79□□□□□ -0.36
PTPN1-201ENST00000371621 LGALS16A8MUM7 142 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 TTI1O43156 1089 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 EEF1GP26641 437 aaKnown RBP12.78□□□□□ -0.36
PTPN1-201ENST00000371621 ZNF211Q13398 564 aaPredicted RBP12.78□□□□□ -0.36
PTPN1-201ENST00000371621 SUPT20HQ8NEM7 779 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 CASKIN2Q8WXE0 1202 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 RAB34Q9BZG1 259 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 MMADHCQ9H3L0 296 aaPredicted RBP12.78□□□□□ -0.36
PTPN1-201ENST00000371621 ARMT1Q9H993 441 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 ABCF3Q9NUQ8 709 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 GALNT8Q9NY28 637 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 SRPRBQ9Y5M8 271 aaKnown RBP12.78□□□□□ -0.36
PTPN1-201ENST00000371621 YTHDC2Q9H6S0 1430 aaKnown RBP12.78□□□□□ -0.36
PTPN1-201ENST00000371621 DPPA5A6NC42 116 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 BRAFP15056 766 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 FGFR4P22455 802 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 TMED2Q15363 201 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 A8MUI8 341 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 AHCYL1O43865 530 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 ADAMTS2O95450 1211 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 ESRRAP11474 423 aaPredicted RBP12.78□□□□□ -0.36
PTPN1-201ENST00000371621 COPS2P61201 443 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 SV2BQ7L1I2 683 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 ARHGAP18Q8N392 663 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 TEX9Q8N6V9 391 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 RASGRP4Q8TDF6 673 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 KIFAP3Q92845 792 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 CLMNQ96JQ2 1002 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 HAUS7Q99871 368 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms