RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 FRMD6Q96NE9 622 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 ZC3H12CQ9C0D7 883 aaKnown RBP4.24□□□□□ -1.73
MCF2-202ENST00000370573 LSG1Q9H089 658 aaKnown RBP4.24□□□□□ -1.73
MCF2-202ENST00000370573 KCNQ5Q9NR82 932 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 DIAPH3Q9NSV4 1193 aa4.24□□□□□ -1.73
MCF2-202ENST00000370573 PDS5AQ29RF7 1337 aaKnown RBP4.24□□□□□ -1.73
MCF2-202ENST00000370573 GOLGB1Q14789 3259 aaKnown RBP4.24□□□□□ -1.73
MCF2-202ENST00000370573 M0R2C6 588 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 HIP1O00291 1037 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 ENPP3O14638 875 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 CPNE3O75131 537 aaKnown RBP4.23□□□□□ -1.73
MCF2-202ENST00000370573 IDH1O75874 414 aaKnown RBP4.23□□□□□ -1.73
MCF2-202ENST00000370573 USP17L7P0C7H9 530 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 PDE6AP16499 860 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 ADD2P35612 726 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 TTF1Q15361 905 aaPredicted RBP4.23□□□□□ -1.73
MCF2-202ENST00000370573 CCDC93Q567U6 631 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 SLC9C2Q5TAH2 1124 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 CASC1Q6TDU7 716 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 NXPE4Q6UWF7 544 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 CCDC129Q6ZRS4 1044 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 TICAM2Q86XR7 235 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 GALNT12Q8IXK2 581 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 TBC1D32Q96NH3 1257 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 TRIM56Q9BRZ2 755 aaKnown RBP4.23□□□□□ -1.73
MCF2-202ENST00000370573 COA1Q9GZY4 146 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 PUS7LQ9H0K6 701 aaKnown RBP4.23□□□□□ -1.73
MCF2-202ENST00000370573 DNAJC25Q9H1X3 360 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 LIN7BQ9HAP6 207 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 HELLSQ9NRZ9 838 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 ADAMTS1Q9UHI8 967 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 RFX7Q2KHR2 1363 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 BRCA1P38398 1863 aaKnown RBP4.23□□□□□ -1.73
MCF2-202ENST00000370573 ZNF532Q9HCE3 1301 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 FRAT2O75474 233 aaPredicted RBP4.23□□□□□ -1.73
MCF2-202ENST00000370573 ARL4DP49703 201 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 GSTM4Q03013 218 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 KIAA2012Q0VF49 1180 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 UBE3CQ15386 1083 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 AOC3Q16853 763 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 MCMDC2Q4G0Z9 681 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 ADGRA1Q86SQ6 560 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 CKAP2LQ8IYA6 745 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 RTKN2Q8IZC4 609 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 MAGEB6Q8N7X4 407 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 PSMD1Q99460 953 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 MXD3Q9BW11 206 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 C22orf23Q9BZE7 217 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 BHLHE41Q9C0J9 482 aaPredicted RBP4.23□□□□□ -1.73
MCF2-202ENST00000370573 TMX4Q9H1E5 349 aaPredicted RBP4.23□□□□□ -1.73
MCF2-202ENST00000370573 EHD4Q9H223 541 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 DBNDD1Q9H9R9 158 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 ZNF277Q9NRM2 450 aaPredicted RBP4.23□□□□□ -1.73
MCF2-202ENST00000370573 ABCF2Q9UG63 623 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 SRCAPQ6ZRS2 3230 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 MAST3O60307 1309 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 FAM205AQ6ZU69 1335 aa4.23□□□□□ -1.73
MCF2-202ENST00000370573 DOCK2Q92608 1830 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 A0A096LPE4 126 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 A0A1W2PPZ6 126 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 FOXP2O15409 715 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 KLF4O43474 513 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 DLGAP3O95886 979 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 ZFYP08048 801 aaPredicted RBP4.22□□□□□ -1.73
MCF2-202ENST00000370573 ESRRAP11474 423 aaPredicted RBP4.22□□□□□ -1.73
MCF2-202ENST00000370573 PRDX5P30044 214 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 PRELPP51888 382 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 ANAPC15P60006 121 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 MECOMQ03112 1051 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 VPS53Q5VIR6 699 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 CCNJLQ8IV13 435 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 ARMC10Q8N2F6 343 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 CERS5Q8N5B7 392 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 WDR66Q8TBY9 1149 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 RUFY2Q8WXA3 655 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 APPBP2Q92624 585 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 UTP4Q969X6 686 aaKnown RBP4.22□□□□□ -1.73
MCF2-202ENST00000370573 NSUN4Q96CB9 384 aaKnown RBP4.22□□□□□ -1.73
MCF2-202ENST00000370573 TCF12Q99081 682 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 EYA3Q99504 573 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 KIF2CQ99661 725 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.22□□□□□ -1.73
MCF2-202ENST00000370573 OSGEPQ9NPF4 335 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 RAI14Q9P0K7 980 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 LRP2BPQ9P2M1 347 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 RAD50Q92878 1312 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 SALL1Q9NSC2 1324 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 COL4A5P29400 1685 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 MYH7P12883 1935 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 YDJCA8MPS7 323 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 PPIP5K2O43314 1243 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 ECE2O60344 883 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 REC8O95072 547 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 CYP7A1P22680 504 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 NASPP49321 788 aaPredicted RBP4.22□□□□□ -1.73
MCF2-202ENST00000370573 ST13P50502 369 aaKnown RBP4.22□□□□□ -1.73
MCF2-202ENST00000370573 MAP3K12Q12852 859 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 RASA3Q14644 834 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 ZSCAN25Q6NSZ9 544 aa4.22□□□□□ -1.73
MCF2-202ENST00000370573 ANKS3Q6ZW76 656 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms