RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 FMR1Q06787 632 aaKnown RBP eCLIP11.96□□□□□ -0.5
TWNK-202ENST00000370228 MAP3K12Q12852 859 aa11.96□□□□□ -0.5
TWNK-202ENST00000370228 RESTQ13127 1097 aa11.96□□□□□ -0.5
TWNK-202ENST00000370228 COL9A3Q14050 684 aaPredicted RBP11.96□□□□□ -0.5
TWNK-202ENST00000370228 CDAN1Q8IWY9 1227 aa11.96□□□□□ -0.5
TWNK-202ENST00000370228 KBTBD3Q8NAB2 608 aa11.96□□□□□ -0.5
TWNK-202ENST00000370228 SENP2Q9HC62 589 aa11.96□□□□□ -0.5
TWNK-202ENST00000370228 L3MBTL1Q9Y468 752 aa11.96□□□□□ -0.5
TWNK-202ENST00000370228 MYO5AQ9Y4I1 1855 aaKnown RBP11.96□□□□□ -0.5
TWNK-202ENST00000370228 A0A087WWV3 80 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 RASSF10A6NK89 507 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 FAM196BA6NMK8 535 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 MAP3K13O43283 966 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 GFPT2O94808 682 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 PENKP01210 267 aaPredicted RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 MMEP08473 750 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 CBX3Q13185 183 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 LCORLQ8N3X6 602 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 ERMNQ8TAM6 284 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 MAIP1Q8WWC4 291 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 PRMT6Q96LA8 375 aaPredicted RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 ATXN10Q9UBB4 475 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 PUF60Q9UHX1 559 aaKnown RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 MKI67P46013 3256 aaKnown RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 DPPA5A6NC42 116 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 TCP10L2B9ZVM9 353 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 LUC7L3O95232 432 aaKnown RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 RHOXF2BP0C7M4 288 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 FCHSD1Q86WN1 690 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 RHOXF2Q9BQY4 288 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 OSBPL1AQ9BXW6 950 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 CNOT7Q9UIV1 285 aaKnown RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 UPP2O95045 317 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 YY1P25490 414 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 XRCC4Q13426 336 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 NAA35Q5VZE5 725 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 APLFQ8IW19 511 aaPredicted RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 SLC15A3Q8IY34 581 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 GBP7Q8N8V2 638 aaPredicted RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 ZBTB8BQ8NAP8 495 aaPredicted RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 LSM14AQ8ND56 463 aaKnown RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 UHMK1Q8TAS1 419 aaKnown RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 SNED1Q8TER0 1413 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 WHAMMQ8TF30 809 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 AIDAQ96BJ3 306 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 NSUN4Q96CB9 384 aaKnown RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 CLIP3Q96DZ5 547 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 OXCT2Q9BYC2 517 aaPredicted RBP11.95□□□□□ -0.5
TWNK-202ENST00000370228 KIAA1551Q9HCM1 1747 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 NMRK2Q9NPI5 230 aa11.95□□□□□ -0.5
TWNK-202ENST00000370228 CCDC88AQ3V6T2 1871 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 A6NNZ2 444 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 AGPSO00116 658 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 NPTXRO95502 500 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 NFIAQ12857 509 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 TUBB8Q3ZCM7 444 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 C6orf89Q6UWU4 347 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 MAPKAPK5Q8IW41 473 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 TRPM4Q8TD43 1214 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 PCDH18Q9HCL0 1135 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 PHEXP78562 749 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 FAM160A1Q05DH4 1040 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 STIM1Q13586 685 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 WDR93Q6P2C0 686 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.94□□□□□ -0.5
TWNK-202ENST00000370228 WDR66Q8TBY9 1149 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 SH3RF3Q8TEJ3 882 aaPredicted RBP11.94□□□□□ -0.5
TWNK-202ENST00000370228 TGFBRAP1Q8WUH2 860 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 OPTNQ96CV9 577 aa11.94□□□□□ -0.5
TWNK-202ENST00000370228 FTOQ9C0B1 505 aaKnown RBP eCLIP11.94□□□□□ -0.5
TWNK-202ENST00000370228 USP17L8P0C7I0 530 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 BTDP43251 543 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 MXRA7P84157 204 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 SKOR1P84550 965 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 NSUN2Q08J23 767 aaKnown RBP eCLIP11.93□□□□□ -0.5
TWNK-202ENST00000370228 STK38Q15208 465 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 STRIP1Q5VSL9 837 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 RSBN1LQ6PCB5 846 aaPredicted RBP11.93□□□□□ -0.5
TWNK-202ENST00000370228 NCCRP1Q6ZVX7 275 aaPredicted RBP11.93□□□□□ -0.5
TWNK-202ENST00000370228 ZSCAN29Q8IWY8 852 aaPredicted RBP11.93□□□□□ -0.5
TWNK-202ENST00000370228 BPIFA3Q9BQP9 254 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 SWAP70Q9UH65 585 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 PAIP2BQ9ULR5 123 aaKnown RBP11.93□□□□□ -0.5
TWNK-202ENST00000370228 CLEC11AQ9Y240 323 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 PPP2R2CQ9Y2T4 447 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 SPO11Q9Y5K1 396 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 PTPDC1A2A3K4 754 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 PALM3A6NDB9 673 aaPredicted RBP11.93□□□□□ -0.5
TWNK-202ENST00000370228 STXBP3O00186 592 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 TPPPO94811 219 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 PSMC4P43686 418 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 CLCN2P51788 898 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 CFAP100Q494V2 611 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 ZFPM1Q8IX07 1006 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 ALDH8A1Q9H2A2 487 aaPredicted RBP11.93□□□□□ -0.5
TWNK-202ENST00000370228 RRAGCQ9HB90 399 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 HELLSQ9NRZ9 838 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 MINDY4BA8MYZ0 360 aa11.93□□□□□ -0.5
TWNK-202ENST00000370228 DNM1LO00429 736 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms