RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 BICDL1Q6ZP65 573 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 TMC4Q7Z404 712 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 REXO1Q8N1G1 1221 aaKnown RBP13.88□□□□□ -0.19
LINC01561-201ENST00000369071 SH2D3CQ8N5H7 860 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 TGFBRAP1Q8WUH2 860 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 CCDC43Q96MW1 224 aaKnown RBP13.88□□□□□ -0.19
LINC01561-201ENST00000369071 CEP72Q9P209 647 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 NFU1Q9UMS0 254 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 NAV1Q8NEY1 1877 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 GRID2IPA4D2P6 1211 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 ZSCAN5CA6NGD5 496 aaPredicted RBP13.88□□□□□ -0.19
LINC01561-201ENST00000369071 SLC37A4O43826 429 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 PALMO75781 387 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 HEXIM1O94992 359 aaKnown RBP13.88□□□□□ -0.19
LINC01561-201ENST00000369071 KRT14P02533 472 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 SERPING1P05155 500 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 LDHBP07195 334 aaKnown RBP13.88□□□□□ -0.19
LINC01561-201ENST00000369071 ERCC3P19447 782 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 LRRC41Q15345 812 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 NAB2Q15742 525 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 DDB1Q16531 1140 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 TBC1D9BQ66K14 1250 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 KDM7AQ6ZMT4 941 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 MMS22LQ6ZRQ5 1243 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 CD302Q8IX05 232 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 PROM2Q8N271 834 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 MARCH10Q8NA82 808 aaPredicted RBP13.88□□□□□ -0.19
LINC01561-201ENST00000369071 DDX12PQ92771 950 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 PIGSQ96S52 555 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 TSG101Q99816 390 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 NUDT12Q9BQG2 462 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 NUCKS1Q9H1E3 243 aaKnown RBP13.88□□□□□ -0.19
LINC01561-201ENST00000369071 EPB41L5Q9HCM4 733 aa13.88□□□□□ -0.19
LINC01561-201ENST00000369071 COL16A1Q07092 1604 aaPredicted RBP13.87□□□□□ -0.19
LINC01561-201ENST00000369071 ATXN2Q99700 1313 aaKnown RBP13.87□□□□□ -0.19
LINC01561-201ENST00000369071 GUCY2CP25092 1073 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 GUCY2DQ02846 1103 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 PAK2Q13177 524 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 PDIA5Q14554 519 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 DIXDC1Q155Q3 683 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 GRIK5Q16478 980 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 TMEM119Q4V9L6 283 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 TDRD12Q587J7 1177 aaKnown RBP13.87□□□□□ -0.19
LINC01561-201ENST00000369071 FAM83BQ5T0W9 1011 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 CFAP58Q5T655 872 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 MEI1Q5TIA1 1274 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 SFMBT2Q5VUG0 894 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 KCNK18Q7Z418 384 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 CDK5RAP3Q96JB5 506 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 CDCA7Q9BWT1 371 aaPredicted RBP13.87□□□□□ -0.19
LINC01561-201ENST00000369071 NLRC4Q9NPP4 1024 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 SEC63Q9UGP8 760 aaKnown RBP13.87□□□□□ -0.19
LINC01561-201ENST00000369071 SAMM50Q9Y512 469 aa13.87□□□□□ -0.19
LINC01561-201ENST00000369071 ESYT3A0FGR9 886 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 ZEB2O60315 1214 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 NAP1L1P55209 391 aaKnown RBP13.86□□□□□ -0.19
LINC01561-201ENST00000369071 TMEM266Q2M3C6 531 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 KCTD16Q68DU8 428 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 NEDD1Q8NHV4 660 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 CASKIN2Q8WXE0 1202 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 NLRP3Q96P20 1036 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 INPP4AQ96PE3 977 aaPredicted RBP13.86□□□□□ -0.19
LINC01561-201ENST00000369071 TANGO6Q9C0B7 1094 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 VAT1LQ9HCJ6 419 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 SAP30BPQ9UHR5 308 aaKnown RBP13.86□□□□□ -0.19
LINC01561-201ENST00000369071 PCDHGC5Q9Y5F6 944 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 COL4A3BPQ9Y5P4 624 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 POTEMA6NI47 508 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 TDP2O95551 362 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 BAG3O95817 575 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 FTCDO95954 541 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 KLRC1P26715 233 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 CDK8P49336 464 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 ATP1A2P50993 1020 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 C16orf86Q6ZW13 317 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 MAPKAPK5Q8IW41 473 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 MYOCDQ8IZQ8 938 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 LINC00116Q8NCU8 138 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 C1orf131Q8NDD1 294 aaKnown RBP13.86□□□□□ -0.19
LINC01561-201ENST00000369071 WDR66Q8TBY9 1149 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 IFT81Q8WYA0 676 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 DNAJC19Q96DA6 116 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 RNPC3Q96LT9 517 aaKnown RBP13.86□□□□□ -0.19
LINC01561-201ENST00000369071 EYA3Q99504 573 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 LRRC27Q9C0I9 530 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 ATP6V0A2Q9Y487 856 aa13.86□□□□□ -0.19
LINC01561-201ENST00000369071 NDUFAB1O14561 156 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 INPP5BP32019 993 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 GSTO1P78417 241 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 FKBP3Q00688 224 aaKnown RBP13.85□□□□□ -0.19
LINC01561-201ENST00000369071 CDC37Q16543 378 aaPredicted RBP13.85□□□□□ -0.19
LINC01561-201ENST00000369071 B4GALNT4Q76KP1 1039 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 SNX29Q8TEQ0 813 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 KRT12Q99456 494 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 LSM14BQ9BX40 385 aaKnown RBP13.85□□□□□ -0.19
LINC01561-201ENST00000369071 RIOX1Q9H6W3 641 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 DDX60LQ5H9U9 1706 aaKnown RBP13.85□□□□□ -0.19
LINC01561-201ENST00000369071 RGL2O15211 777 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms