RNA–Protein interactions for RNA: ENST00000368930.5

CDC40-202, Transcript of cell division cycle 40, humanhuman

TSL 2 BASIC

Gene CDC40, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-202ENST00000368930 USP17L11C9JVI0 530 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 USP17L18D6R9N7 530 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 USP17L22D6RA61 530 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 USP17L17D6RBQ6 530 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 USP17L19D6RCP7 530 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 USP17L20D6RJB6 530 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 SLC26A4O43511 780 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 SRGAP2O75044 1071 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 EEF2P13639 858 aaKnown RBP12.34□□□□□ -0.43
CDC40-202ENST00000368930 USP17L24Q0WX57 530 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 USP17L6PQ6QN14 398 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 PODNQ7Z5L7 613 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 C2CD5Q86YS7 1000 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 DCAF4Q8WV16 495 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 BAP1Q92560 729 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 MBOAT7Q96N66 472 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 EDEM3Q9BZQ6 932 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 GBP3Q9H0R5 595 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 DHX36Q9H2U1 1008 aaKnown RBP12.34□□□□□ -0.43
CDC40-202ENST00000368930 MMRN2Q9H8L6 949 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 KANSL2Q9H9L4 492 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 KCNMB3Q9NPA1 279 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 KCNQ5Q9NR82 932 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 NYAP2Q9P242 653 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 PCDHA2Q9Y5H9 948 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 PCDHA1Q9Y5I3 950 aa12.34□□□□□ -0.43
CDC40-202ENST00000368930 BRWD3Q6RI45 1802 aa12.33□□□□□ -0.44
CDC40-202ENST00000368930 G3V3G9 751 aa12.33□□□□□ -0.44
CDC40-202ENST00000368930 HMGB2P26583 209 aaKnown RBP12.33□□□□□ -0.44
CDC40-202ENST00000368930 PDE6BP35913 854 aa12.33□□□□□ -0.44
CDC40-202ENST00000368930 USP14P54578 494 aa12.33□□□□□ -0.44
CDC40-202ENST00000368930 FKBP3Q00688 224 aaKnown RBP12.33□□□□□ -0.44
CDC40-202ENST00000368930 FAM26FQ5R3K3 315 aa12.33□□□□□ -0.44
CDC40-202ENST00000368930 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
CDC40-202ENST00000368930 ARHGAP27Q6ZUM4 889 aa12.33□□□□□ -0.44
CDC40-202ENST00000368930 KRT26Q7Z3Y9 468 aa12.33□□□□□ -0.44
CDC40-202ENST00000368930 SIAH1Q8IUQ4 282 aa12.33□□□□□ -0.44
CDC40-202ENST00000368930 RPGRIP1Q96KN7 1286 aa12.33□□□□□ -0.44
CDC40-202ENST00000368930 BMP2KQ9NSY1 1161 aaPredicted RBP12.33□□□□□ -0.44
CDC40-202ENST00000368930 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.33□□□□□ -0.44
CDC40-202ENST00000368930 KIAA1024Q9UPX6 916 aa12.33□□□□□ -0.44
CDC40-202ENST00000368930 PCDHA13Q9Y5I0 950 aa12.33□□□□□ -0.44
CDC40-202ENST00000368930 COL11A2P13942 1736 aaPredicted RBP12.33□□□□□ -0.44
CDC40-202ENST00000368930 MACROD2A1Z1Q3 448 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 DDTLA6NHG4 134 aaPredicted RBP12.32□□□□□ -0.44
CDC40-202ENST00000368930 E9PMD0 336 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 EIF4A3P38919 411 aaKnown RBP12.32□□□□□ -0.44
CDC40-202ENST00000368930 SLC1A4P43007 532 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 KIF11P52732 1056 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 KCNMA1Q12791 1236 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 CDC37Q16543 378 aaPredicted RBP12.32□□□□□ -0.44
CDC40-202ENST00000368930 SHROOM1Q2M3G4 852 aaPredicted RBP12.32□□□□□ -0.44
CDC40-202ENST00000368930 CERKLQ49MI3 558 aaPredicted RBP12.32□□□□□ -0.44
CDC40-202ENST00000368930 SLFN13Q68D06 897 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 KRT27Q7Z3Y8 459 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 CRYGNQ8WXF5 182 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 SECISBP2LQ93073 1101 aaKnown RBP12.32□□□□□ -0.44
CDC40-202ENST00000368930 MASTLQ96GX5 879 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 IDI2Q9BXS1 227 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 IFIH1Q9BYX4 1025 aaKnown RBP12.32□□□□□ -0.44
CDC40-202ENST00000368930 QTRT2Q9H974 415 aaKnown RBP12.32□□□□□ -0.44
CDC40-202ENST00000368930 PI4KBQ9UBF8 816 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 COL4A3BPQ9Y5P4 624 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 LRRC53A6NM62 1247 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 H3BQF6 201 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 MEIS2O14770 477 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 USO1O60763 962 aaKnown RBP12.32□□□□□ -0.44
CDC40-202ENST00000368930 PLA2G4BP0C869 781 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 CACNB3P54284 484 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 CKAP4Q07065 602 aaKnown RBP12.32□□□□□ -0.44
CDC40-202ENST00000368930 TCP10Q12799 353 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 TATDN1Q6P1N9 297 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 MOXD1Q6UVY6 613 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 RRAGAQ7L523 313 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 SH3BP5LQ7L8J4 393 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 COL23A1Q86Y22 540 aaPredicted RBP12.32□□□□□ -0.44
CDC40-202ENST00000368930 CCDC65Q8IXS2 484 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 CEP63Q96MT8 703 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 FGFBP2Q9BYJ0 223 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 ANO3Q9BYT9 981 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 TMX4Q9H1E5 349 aaPredicted RBP12.32□□□□□ -0.44
CDC40-202ENST00000368930 SH2D4AQ9H788 454 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 SUGCTQ9HAC7 445 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 PCDHAC2Q9Y5I4 1007 aa12.32□□□□□ -0.44
CDC40-202ENST00000368930 MYH10P35580 1976 aa12.31□□□□□ -0.44
CDC40-202ENST00000368930 TARSL2A2RTX5 802 aaKnown RBP12.31□□□□□ -0.44
CDC40-202ENST00000368930 FAM196BA6NMK8 535 aa12.31□□□□□ -0.44
CDC40-202ENST00000368930 TRAF5O00463 557 aa12.31□□□□□ -0.44
CDC40-202ENST00000368930 SSBP05455 408 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDC40-202ENST00000368930 MARSP56192 900 aaKnown RBP12.31□□□□□ -0.44
CDC40-202ENST00000368930 FKBP1AP62942 108 aaKnown RBP12.31□□□□□ -0.44
CDC40-202ENST00000368930 HDLBPQ00341 1268 aaKnown RBP12.31□□□□□ -0.44
CDC40-202ENST00000368930 AP3B2Q13367 1082 aa12.31□□□□□ -0.44
CDC40-202ENST00000368930 ASTE1Q2TB18 679 aaPredicted RBP12.31□□□□□ -0.44
CDC40-202ENST00000368930 STRIP1Q5VSL9 837 aa12.31□□□□□ -0.44
CDC40-202ENST00000368930 PDXDC1Q6P996 788 aa12.31□□□□□ -0.44
CDC40-202ENST00000368930 KIAA0825Q8IV33 1275 aa12.31□□□□□ -0.44
CDC40-202ENST00000368930 SLFN12Q8IYM2 578 aa12.31□□□□□ -0.44
CDC40-202ENST00000368930 TRIM58Q8NG06 486 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms