RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 RIOK1Q9BRS2 568 aaKnown RBP12.43□□□□□ -0.42
TUBE1-201ENST00000368657 ADD3Q9UEY8 706 aaKnown RBP12.43□□□□□ -0.42
TUBE1-201ENST00000368657 NAV1Q8NEY1 1877 aa12.42□□□□□ -0.42
TUBE1-201ENST00000368657 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.42□□□□□ -0.42
TUBE1-201ENST00000368657 MAGEB6P1A0A0J9YX57 407 aa12.42□□□□□ -0.42
TUBE1-201ENST00000368657 RSPH10B2B2RC85 870 aa12.42□□□□□ -0.42
TUBE1-201ENST00000368657 E9PSI1 815 aa12.42□□□□□ -0.42
TUBE1-201ENST00000368657 RSPH10BP0C881 870 aa12.42□□□□□ -0.42
TUBE1-201ENST00000368657 CDK8P49336 464 aa12.42□□□□□ -0.42
TUBE1-201ENST00000368657 LMNB2Q03252 620 aa12.42□□□□□ -0.42
TUBE1-201ENST00000368657 TRIM71Q2Q1W2 868 aaKnown RBP12.42□□□□□ -0.42
TUBE1-201ENST00000368657 RBM23Q86U06 439 aaKnown RBP12.42□□□□□ -0.42
TUBE1-201ENST00000368657 C7orf31Q8N865 590 aa12.42□□□□□ -0.42
TUBE1-201ENST00000368657 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
TUBE1-201ENST00000368657 ZFP91Q96JP5 570 aaPredicted RBP12.42□□□□□ -0.42
TUBE1-201ENST00000368657 TRERF1Q96PN7 1200 aa12.42□□□□□ -0.42
TUBE1-201ENST00000368657 S1PR5Q9H228 398 aa12.42□□□□□ -0.42
TUBE1-201ENST00000368657 TLE6Q9H808 572 aa12.42□□□□□ -0.42
TUBE1-201ENST00000368657 RNF146Q9NTX7 359 aa12.42□□□□□ -0.42
TUBE1-201ENST00000368657 DDX49Q9Y6V7 483 aaKnown RBP12.42□□□□□ -0.42
TUBE1-201ENST00000368657 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-201ENST00000368657 ANP32CO43423 234 aa12.41□□□□□ -0.42
TUBE1-201ENST00000368657 SRGAP2BP0DMP2 458 aa12.41□□□□□ -0.42
TUBE1-201ENST00000368657 NPR3P17342 541 aa12.41□□□□□ -0.42
TUBE1-201ENST00000368657 PPP2R5BQ15173 497 aa12.41□□□□□ -0.42
TUBE1-201ENST00000368657 SUMF1Q8NBK3 374 aa12.41□□□□□ -0.42
TUBE1-201ENST00000368657 SPPL3Q8TCT6 385 aa12.41□□□□□ -0.42
TUBE1-201ENST00000368657 CDCA3Q99618 268 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-201ENST00000368657 DCP1AQ9NPI6 582 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-201ENST00000368657 CYP39A1Q9NYL5 469 aa12.41□□□□□ -0.42
TUBE1-201ENST00000368657 MYO5AQ9Y4I1 1855 aaKnown RBP12.4□□□□□ -0.42
TUBE1-201ENST00000368657 ASPMQ8IZT6 3477 aa12.4□□□□□ -0.42
TUBE1-201ENST00000368657 SRGAP3O43295 1099 aa12.4□□□□□ -0.42
TUBE1-201ENST00000368657 CSPG5O95196 566 aa12.4□□□□□ -0.42
TUBE1-201ENST00000368657 CASTP20810 708 aaKnown RBP12.4□□□□□ -0.42
TUBE1-201ENST00000368657 G3BP1Q13283 466 aaKnown RBP eCLIP12.4□□□□□ -0.42
TUBE1-201ENST00000368657 VARS2Q5ST30 1063 aaKnown RBP12.4□□□□□ -0.42
TUBE1-201ENST00000368657 TMEM184AQ6ZMB5 413 aa12.4□□□□□ -0.42
TUBE1-201ENST00000368657 RPAP2Q8IXW5 612 aaPredicted RBP12.4□□□□□ -0.42
TUBE1-201ENST00000368657 SCFD2Q8WU76 684 aa12.4□□□□□ -0.42
TUBE1-201ENST00000368657 APBB2Q92870 758 aa12.4□□□□□ -0.42
TUBE1-201ENST00000368657 SECISBP2LQ93073 1101 aaKnown RBP12.4□□□□□ -0.42
TUBE1-201ENST00000368657 GPR108Q9NPR9 543 aa12.4□□□□□ -0.42
TUBE1-201ENST00000368657 NYAP2Q9P242 653 aa12.4□□□□□ -0.42
TUBE1-201ENST00000368657 NCDNQ9UBB6 729 aa12.4□□□□□ -0.42
TUBE1-201ENST00000368657 HDAC6Q9UBN7 1215 aa12.4□□□□□ -0.42
TUBE1-201ENST00000368657 ANGPTL2Q9UKU9 493 aa12.4□□□□□ -0.42
TUBE1-201ENST00000368657 NDUFB10O96000 172 aa12.39□□□□□ -0.43
TUBE1-201ENST00000368657 TXNP10599 105 aaKnown RBP12.39□□□□□ -0.43
TUBE1-201ENST00000368657 CYP2D6P10635 497 aa12.39□□□□□ -0.43
TUBE1-201ENST00000368657 DNAJB1P25685 340 aa12.39□□□□□ -0.43
TUBE1-201ENST00000368657 PDE4BQ07343 736 aa12.39□□□□□ -0.43
TUBE1-201ENST00000368657 PPM1JQ5JR12 505 aa12.39□□□□□ -0.43
TUBE1-201ENST00000368657 TSHZ2Q9NRE2 1034 aa12.39□□□□□ -0.43
TUBE1-201ENST00000368657 MYH8P13535 1937 aa12.39□□□□□ -0.43
TUBE1-201ENST00000368657 ADGRA3Q8IWK6 1321 aa12.38□□□□□ -0.43
TUBE1-201ENST00000368657 ITGB1P05556 798 aa12.38□□□□□ -0.43
TUBE1-201ENST00000368657 ALAS1P13196 640 aa12.38□□□□□ -0.43
TUBE1-201ENST00000368657 HOXB8P17481 243 aaPredicted RBP12.38□□□□□ -0.43
TUBE1-201ENST00000368657 BTG3Q14201 252 aaPredicted RBP12.38□□□□□ -0.43
TUBE1-201ENST00000368657 C16orf86Q6ZW13 317 aa12.38□□□□□ -0.43
TUBE1-201ENST00000368657 AMOTL1Q8IY63 956 aa12.38□□□□□ -0.43
TUBE1-201ENST00000368657 ZDHHC14Q8IZN3 488 aa12.38□□□□□ -0.43
TUBE1-201ENST00000368657 POF1BQ8WVV4 589 aa12.38□□□□□ -0.43
TUBE1-201ENST00000368657 KAT2BQ92831 832 aa12.38□□□□□ -0.43
TUBE1-201ENST00000368657 NECTIN4Q96NY8 510 aa12.38□□□□□ -0.43
TUBE1-201ENST00000368657 MPHOSPH6Q99547 160 aaKnown RBP12.38□□□□□ -0.43
TUBE1-201ENST00000368657 KATNAL1Q9BW62 490 aa12.38□□□□□ -0.43
TUBE1-201ENST00000368657 C2CD4DB7Z1M9 353 aa12.37□□□□□ -0.43
TUBE1-201ENST00000368657 KINO60870 393 aaKnown RBP12.37□□□□□ -0.43
TUBE1-201ENST00000368657 PROS1P07225 676 aa12.37□□□□□ -0.43
TUBE1-201ENST00000368657 SP9P0CG40 484 aa12.37□□□□□ -0.43
TUBE1-201ENST00000368657 SP100P23497 879 aaPredicted RBP12.37□□□□□ -0.43
TUBE1-201ENST00000368657 THPOP40225 353 aa12.37□□□□□ -0.43
TUBE1-201ENST00000368657 ALDH5A1P51649 535 aaPredicted RBP12.37□□□□□ -0.43
TUBE1-201ENST00000368657 ZNF200P98182 395 aaPredicted RBP12.37□□□□□ -0.43
TUBE1-201ENST00000368657 MTX1Q13505 466 aa12.37□□□□□ -0.43
TUBE1-201ENST00000368657 ANKRD54Q6NXT1 300 aa12.37□□□□□ -0.43
TUBE1-201ENST00000368657 MICAL1Q8TDZ2 1067 aa12.37□□□□□ -0.43
TUBE1-201ENST00000368657 CHURC1Q8WUH1 139 aa12.37□□□□□ -0.43
TUBE1-201ENST00000368657 COPS5Q92905 334 aa12.37□□□□□ -0.43
TUBE1-201ENST00000368657 ZNF689Q96CS4 500 aaPredicted RBP12.37□□□□□ -0.43
TUBE1-201ENST00000368657 SMOC2Q9H3U7 446 aa12.37□□□□□ -0.43
TUBE1-201ENST00000368657 PER2O15055 1255 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 DUSP6Q16828 381 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 CCDC184Q52MB2 194 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 C12orf60Q5U649 245 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 NSMFQ6X4W1 530 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 KLHL23Q8NBE8 558 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 SDR42E1Q8WUS8 393 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 WNT8BQ93098 351 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 MKL1Q969V6 931 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 DBNDD2Q9BQY9 259 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 RC3H2Q9HBD1 1191 aaKnown RBP12.36□□□□□ -0.43
TUBE1-201ENST00000368657 ATP8A2Q9NTI2 1148 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 LIMD1Q9UGP4 676 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 SYNPO2Q9UMS6 1093 aa12.36□□□□□ -0.43
TUBE1-201ENST00000368657 B4DLN1 442 aa12.35□□□□□ -0.43
TUBE1-201ENST00000368657 STK25O00506 426 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms