RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 HMGN5P82970 282 aaKnown RBP11.46□□□□□ -0.57
TPM3-210ENST00000368530 IKQ13123 557 aaPredicted RBP11.46□□□□□ -0.57
TPM3-210ENST00000368530 BAATQ14032 418 aaPredicted RBP11.46□□□□□ -0.57
TPM3-210ENST00000368530 RAB30Q15771 203 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 DUSP28Q4G0W2 176 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 TPRNQ4KMQ1 711 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 CLEC4DQ8WXI8 215 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 PPM1EQ8WY54 764 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 ASB2Q96Q27 587 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 MSRAQ9UJ68 235 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 CCPG1Q9ULG6 757 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 SLC12A7Q9Y666 1083 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 REV3LO60673 3130 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 TNKSO95271 1327 aa11.46□□□□□ -0.58
TPM3-210ENST00000368530 DHX16O60231 1041 aaKnown RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 MYOGP15173 224 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 ADD1P35611 737 aaKnown RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 LIFRP42702 1097 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 RABGGTBP53611 331 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 PURAQ00577 322 aaKnown RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 GUCY1B3Q02153 619 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 SKOR2Q2VWA4 1001 aaPredicted RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 PPP4R3BQ5MIZ7 849 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 FAM173BQ6P4H8 233 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 NSMFQ6X4W1 530 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 SYNE3Q6ZMZ3 975 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 SGMS1Q86VZ5 419 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 DCAF4Q8WV16 495 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 SCLYQ96I15 445 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 SLC28A3Q9HAS3 691 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 ORC3Q9UBD5 711 aaPredicted RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 ISY1Q9ULR0 285 aaKnown RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 ATP6V1DQ9Y5K8 247 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 LOC102724159A0A0B4J2E5 919 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 FIBPO43427 364 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 ZEB2O60315 1214 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 CYP2C9P11712 490 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 FDPSP14324 419 aaKnown RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 CDC27P30260 824 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 ALDH5A1P51649 535 aaPredicted RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 DNM1Q05193 864 aaKnown RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 TTLL4Q14679 1199 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 PWP2Q15269 919 aaKnown RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 CCDC85BQ15834 202 aaPredicted RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 ZSCAN10Q96SZ4 725 aaPredicted RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 TMEM47Q9BQJ4 181 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 WDR11Q9BZH6 1224 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 TCP11L1Q9NUJ3 509 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 TRMT13Q9NUP7 481 aaKnown RBP11.45□□□□□ -0.58
TPM3-210ENST00000368530 KIF3AQ9Y496 699 aa11.45□□□□□ -0.58
TPM3-210ENST00000368530 XIRP2A4UGR9 3374 aa11.44□□□□□ -0.58
TPM3-210ENST00000368530 BDP1A6H8Y1 2624 aa11.44□□□□□ -0.58
TPM3-210ENST00000368530 EDNRBP24530 442 aa11.44□□□□□ -0.58
TPM3-210ENST00000368530 SYDE2Q5VT97 1194 aa11.44□□□□□ -0.58
TPM3-210ENST00000368530 RPUSD2Q8IZ73 545 aaKnown RBP11.44□□□□□ -0.58
TPM3-210ENST00000368530 ZNF654Q8IZM8 581 aa11.44□□□□□ -0.58
TPM3-210ENST00000368530 ENAHQ8N8S7 591 aaPredicted RBP11.44□□□□□ -0.58
TPM3-210ENST00000368530 PHKBQ93100 1093 aa11.44□□□□□ -0.58
TPM3-210ENST00000368530 THEGQ9P2T0 379 aa11.44□□□□□ -0.58
TPM3-210ENST00000368530 MTMR7Q9Y216 660 aa11.44□□□□□ -0.58
TPM3-210ENST00000368530 PCDHA11Q9Y5I1 949 aa11.44□□□□□ -0.58
TPM3-210ENST00000368530 SLC4A7Q9Y6M7 1214 aa11.44□□□□□ -0.58
TPM3-210ENST00000368530 TRANK1O15050 2925 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 HAX1O00165 279 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 GADD45BO75293 160 aaPredicted RBP11.43□□□□□ -0.58
TPM3-210ENST00000368530 SNHG28P0DPA3 235 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 PDHBP11177 359 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 TOP1P11387 765 aaKnown RBP11.43□□□□□ -0.58
TPM3-210ENST00000368530 PCP11498 1178 aaKnown RBP11.43□□□□□ -0.58
TPM3-210ENST00000368530 PDIA4P13667 645 aaKnown RBP11.43□□□□□ -0.58
TPM3-210ENST00000368530 POU3F3P20264 500 aaPredicted RBP11.43□□□□□ -0.58
TPM3-210ENST00000368530 IGFBP4P22692 258 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 MRPS5P82675 430 aaKnown RBP11.43□□□□□ -0.58
TPM3-210ENST00000368530 RESTQ13127 1097 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 SEC23AQ15436 765 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 RTN1Q16799 776 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 IFIT1BQ5T764 474 aaKnown RBP11.43□□□□□ -0.58
TPM3-210ENST00000368530 CPLX2Q6PUV4 134 aaKnown RBP11.43□□□□□ -0.58
TPM3-210ENST00000368530 SLC30A10Q6XR72 485 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 IQCA1Q86XH1 822 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 GPT2Q8TD30 523 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 MTIF3Q9H2K0 278 aaKnown RBP11.43□□□□□ -0.58
TPM3-210ENST00000368530 GPCPD1Q9NPB8 672 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 POLR3EQ9NVU0 708 aa11.43□□□□□ -0.58
TPM3-210ENST00000368530 ADD3Q9UEY8 706 aaKnown RBP11.43□□□□□ -0.58
TPM3-210ENST00000368530 FRMPD2Q68DX3 1309 aaPredicted RBP11.42□□□□□ -0.58
TPM3-210ENST00000368530 A6NJR5 290 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 CDKL5O76039 1030 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 SUPT20HL2P0C7V6 817 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 BMP1P13497 986 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 CCDC96Q2M329 555 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 KLHL40Q2TBA0 621 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 NBPF20Q3BBV1 942 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 TMTC2Q8N394 836 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 ADAMTS19Q8TE59 1207 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 PPP1R13LQ8WUF5 828 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 COPS5Q92905 334 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 RNF25Q96BH1 459 aaPredicted RBP11.42□□□□□ -0.58
TPM3-210ENST00000368530 C8orf76Q96K31 380 aa11.42□□□□□ -0.58
TPM3-210ENST00000368530 MTA3Q9BTC8 594 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms