RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 COL4A3BPQ9Y5P4 624 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 FHOD1Q9Y613 1164 aa11.34□□□□□ -0.59
TPM3-209ENST00000368527 RGPD3A6NKT7 1758 aaPredicted RBP11.33□□□□□ -0.59
TPM3-209ENST00000368527 RGPD4Q7Z3J3 1758 aa11.33□□□□□ -0.59
TPM3-209ENST00000368527 SPDYE3A6NKU9 549 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 USP17L10C9JJH3 530 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 PIK3CDO00329 1044 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 TACC1O75410 805 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 CYP3A4P08684 503 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 MMP10P09238 476 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 EEF2P13639 858 aaKnown RBP11.33□□□□□ -0.6
TPM3-209ENST00000368527 IDEP14735 1019 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 CIITAP33076 1130 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 SREBF1P36956 1147 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 ATP2B2Q01814 1243 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 CDC37Q16543 378 aaPredicted RBP11.33□□□□□ -0.6
TPM3-209ENST00000368527 DOK7Q18PE1 504 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 ABCB5Q2M3G0 1257 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 RBM26Q5T8P6 1007 aaKnown RBP11.33□□□□□ -0.6
TPM3-209ENST00000368527 SYDE2Q5VT97 1194 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 TAF3Q5VWG9 929 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 WDR93Q6P2C0 686 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 WDR59Q6PJI9 974 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 HDXQ7Z353 690 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 TRAPPC11Q7Z392 1133 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 COL23A1Q86Y22 540 aaPredicted RBP11.33□□□□□ -0.6
TPM3-209ENST00000368527 C2CD5Q86YS7 1000 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 ZC3H3Q8IXZ2 948 aaKnown RBP11.33□□□□□ -0.6
TPM3-209ENST00000368527 RNF10Q8N5U6 811 aaKnown RBP11.33□□□□□ -0.6
TPM3-209ENST00000368527 LRRC15Q8TF66 581 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 HAS1Q92839 578 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 DNAJC19Q96DA6 116 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 ALS2CR12Q96Q35 445 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 PURBQ96QR8 312 aaKnown RBP11.33□□□□□ -0.6
TPM3-209ENST00000368527 PARD6BQ9BYG5 372 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 SH2D4AQ9H788 454 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 SLC39A2Q9NP94 309 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 ZNF446Q9NWS9 450 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 RNF14Q9UBS8 474 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 SIK3Q9Y2K2 1263 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 SAR1BQ9Y6B6 198 aa11.33□□□□□ -0.6
TPM3-209ENST00000368527 FRMD3A2A2Y4 597 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 ECE2O60344 883 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 PLA2G6O60733 806 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 PPP1R11O60927 126 aaPredicted RBP11.32□□□□□ -0.6
TPM3-209ENST00000368527 PLA2G4BP0C869 781 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 FCER1AP12319 257 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 GAP43P17677 238 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 SCNN1DP51172 638 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 EIF6P56537 245 aaKnown RBP11.32□□□□□ -0.6
TPM3-209ENST00000368527 AMPD2Q01433 879 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 COASYQ13057 564 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 ZCWPW2Q504Y3 356 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 C10orf76Q5T2E6 689 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 FKBP1CQ5VVH2 108 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 LRRC55Q6ZSA7 311 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 CRYGNQ8WXF5 182 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 UPF1Q92900 1129 aaKnown RBP eCLIP11.32□□□□□ -0.6
TPM3-209ENST00000368527 SECISBP2LQ93073 1101 aaKnown RBP11.32□□□□□ -0.6
TPM3-209ENST00000368527 CHP1Q99653 195 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 ARID3AQ99856 593 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 DEF6Q9H4E7 631 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 ARHGEF10LQ9HCE6 1279 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 CEP72Q9P209 647 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 GUCA1BQ9UMX6 200 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 DNM3Q9UQ16 869 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 JRKLQ9Y4A0 524 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 ATP8B3O60423 1300 aa11.32□□□□□ -0.6
TPM3-209ENST00000368527 POTEMA6NI47 508 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 F5H6K3 240 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 RNF225M0QZC1 329 aaPredicted RBP11.31□□□□□ -0.6
TPM3-209ENST00000368527 CETN3O15182 167 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 PJA2O43164 708 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 KRT18P05783 430 aaKnown RBP11.31□□□□□ -0.6
TPM3-209ENST00000368527 BMP3P12645 472 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 TCP1P17987 556 aaKnown RBP11.31□□□□□ -0.6
TPM3-209ENST00000368527 RPL13P26373 211 aaKnown RBP11.31□□□□□ -0.6
TPM3-209ENST00000368527 RPA1P27694 616 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 RXRBP28702 533 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 RBM5P52756 815 aaKnown RBP eCLIP11.31□□□□□ -0.6
TPM3-209ENST00000368527 ARHGAP4P98171 946 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 KLRC3Q07444 240 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 TERF2Q15554 542 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 UBE2SQ16763 222 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 SLC9C1Q4G0N8 1177 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 CCDC40Q4G0X9 1142 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 STXBP4Q6ZWJ1 553 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 KCTD1Q719H9 257 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 DYMQ7RTS9 669 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 CACNA2D4Q7Z3S7 1137 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 ZNF622Q969S3 477 aaKnown RBP eCLIP11.31□□□□□ -0.63e-8■■□□□ 13.8
TPM3-209ENST00000368527 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
TPM3-209ENST00000368527 METTL14Q9HCE5 456 aaKnown RBP11.31□□□□□ -0.6
TPM3-209ENST00000368527 GOPCQ9HD26 462 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 HDAC9Q9UKV0 1011 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 PNMA2Q9UL42 364 aa11.31□□□□□ -0.6
TPM3-209ENST00000368527 REXO2Q9Y3B8 237 aaKnown RBP11.31□□□□□ -0.6
TPM3-209ENST00000368527 BZW2Q9Y6E2 419 aaKnown RBP11.31□□□□□ -0.6
TPM3-209ENST00000368527 UBE4BO95155 1302 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms