RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 IPPKQ9H8X2 491 aa4.84□□□□□ -1.63
RNU4-48P-201ENST00000365559 PCDHA9Q9Y5H5 950 aa4.84□□□□□ -1.63
RNU4-48P-201ENST00000365559 ESYT3A0FGR9 886 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 ARVCFO00192 962 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 NCAM1P13591 858 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 FOXO4P98177 505 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 GUCY1A3Q02108 690 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 PAK1Q13153 545 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 CHRNA2Q15822 529 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 OTOP3Q7RTS5 596 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 AMIGO3Q86WK7 504 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 FAM129CQ86XR2 697 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 C1QL4Q86Z23 238 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 RBM12BQ8IXT5 1001 aaKnown RBP4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 LRRC56Q8IYG6 542 aaPredicted RBP4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 FAM26EQ8N5C1 309 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 ARRDC4Q8NCT1 418 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 GSTCDQ8NEC7 633 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 PCDH19Q8TAB3 1148 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 CPA5Q8WXQ8 436 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 SCLYQ96I15 445 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 SYT3Q9BQG1 590 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 IRF2BPLQ9H1B7 796 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 NCOA5Q9HCD5 579 aaKnown RBP4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 SLC6A20Q9NP91 592 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 ZNF652Q9Y2D9 606 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 PCDHB4Q9Y5E5 795 aa4.83□□□□□ -1.64
RNU4-48P-201ENST00000365559 CCDC163A0A0D9SF12 145 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 TCRBV5S2A0A599 114 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 FAM47E-STBD1D6RA91 191 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 PPP1R12AO14974 1030 aaPredicted RBP4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 SLC27A2O14975 620 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 NKRFO15226 690 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 NUAK1O60285 661 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 RASGRP1O95267 797 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 RAPGEF3O95398 923 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 C8BP07358 591 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 SRGAP2CP0DJJ0 459 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 GNAT1P11488 350 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 RANGAP1P46060 587 aaPredicted RBP4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 JAG1P78504 1218 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 CACNB2Q08289 660 aaPredicted RBP4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 TRIM61Q5EBN2 209 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 HABP4Q5JVS0 413 aaKnown RBP4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 ETV3LQ6ZN32 361 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 FGD2Q7Z6J4 655 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 B3GNT8Q7Z7M8 397 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 JAZF1Q86VZ6 243 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 MIB1Q86YT6 1006 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 SMARCC2Q8TAQ2 1214 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 TOX2Q96NM4 488 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 CLUHP3Q96NS8 147 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 MRPL4Q9BYD3 311 aaKnown RBP4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 TMEM260Q9NX78 707 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 MYOTQ9UBF9 498 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 SFMBT1Q9UHJ3 866 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 FAN1Q9Y2M0 1017 aa4.82□□□□□ -1.64
RNU4-48P-201ENST00000365559 TCRBV5S4A2TA0A5A2 114 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 RFXAPO00287 272 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 KRIT1O00522 736 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 WNT9AO14904 365 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 EFCAB14O75071 495 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 PLA2G1BP04054 148 aaKnown RBP4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 STAT5AP42229 794 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 SPIRE1Q08AE8 756 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 ZNF385BQ569K4 471 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 CIAPIN1Q6FI81 312 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 CNKSR3Q6P9H4 555 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 BRAPQ7Z569 592 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 FAM126BQ8IXS8 530 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 DACT3Q96B18 629 aaPredicted RBP4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 DDX11Q96FC9 970 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 PWWP2AQ96N64 755 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 SMOC1Q9H4F8 434 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 TRIM39Q9HCM9 518 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 ASH2LQ9UBL3 628 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 CBLCQ9ULV8 474 aa4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 MRPL42Q9Y6G3 142 aaKnown RBP4.81□□□□□ -1.64
RNU4-48P-201ENST00000365559 PLD2O14939 933 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 KCNQ2O43526 872 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 ASMTLO95671 621 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 LTFP02788 710 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 PYGMP11217 842 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 CR1LQ2VPA4 569 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 CYP4F22Q6NT55 531 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 CD300LDQ6UXZ3 194 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 LCNL1Q6ZST4 164 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 ZC3H7AQ8IWR0 971 aaKnown RBP4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 UHMK1Q8TAS1 419 aaKnown RBP4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 SH3RF2Q8TEC5 729 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 CLEC4DQ8WXI8 215 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 FBXW5Q969U6 566 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 MAGEB10Q96LZ2 347 aaPredicted RBP4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 NOX5Q96PH1 765 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 CATSPERZQ9NTU4 200 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 TELO2Q9Y4R8 837 aa4.8□□□□□ -1.64
RNU4-48P-201ENST00000365559 TCRBV16S1A1N1A0A5B0 115 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 CCDC66A2RUB6 948 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 IGSF3O75054 1194 aa4.79□□□□□ -1.64
RNU4-48P-201ENST00000365559 CKMP06732 381 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms