RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SCNN1DP51172 638 aa15.21■□□□□ 0.02
COL6A1-201ENST00000361866 CCDC63Q8NA47 563 aa15.21■□□□□ 0.02
COL6A1-201ENST00000361866 EMILIN3Q9NT22 766 aa15.21■□□□□ 0.02
COL6A1-201ENST00000361866 ADGRL3Q9HAR2 1447 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 ARHGEF35A5YM69 484 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 KRT15P19012 456 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 SEC24CP53992 1094 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 DPH6Q7L8W6 267 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 ADSSL1Q8N142 457 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 PPP1R14CQ8TAE6 165 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 TMEM260Q9NX78 707 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 DAAM1Q9Y4D1 1078 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 PCDHA1Q9Y5I3 950 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 LAD1O00515 517 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 SPATS2Q86XZ4 545 aaKnown RBP15.2■□□□□ 0.02
COL6A1-201ENST00000361866 PHF20Q9BVI0 1012 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 GGA1Q9UJY5 639 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 VIRMAQ69YN4 1812 aaKnown RBP15.2■□□□□ 0.02
COL6A1-201ENST00000361866 SFI1A8K8P3 1242 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 BIRC3Q13489 604 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 NTRK3Q16288 839 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 FAM83BQ5T0W9 1011 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 IL17RAQ96F46 866 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 GOLPH3Q9H4A6 298 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 INTS13Q9NVM9 706 aa15.2■□□□□ 0.02
COL6A1-201ENST00000361866 DMGDHQ9UI17 866 aaKnown RBP15.2■□□□□ 0.02
COL6A1-201ENST00000361866 SERPING1P05155 500 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 ZNF131P52739 623 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 EZH2Q15910 746 aaKnown RBP15.19■□□□□ 0.02
COL6A1-201ENST00000361866 LRRC31Q6UY01 552 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 OTUD6AQ7L8S5 288 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 TAB3Q8N5C8 712 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-201ENST00000361866 CCDC197Q8NCU1 140 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 CCDC127Q96BQ5 260 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 TMEM60Q9H2L4 133 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 ATP2A1O14983 1001 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 SMIM5Q71RC9 77 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 MAGEF1Q9HAY2 307 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 PRPF6O94906 941 aaKnown RBP15.19■□□□□ 0.02
COL6A1-201ENST00000361866 MYL1P05976 194 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 ZNF18P17022 549 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 HNRNPLLQ8WVV9 542 aaKnown RBP15.19■□□□□ 0.02
COL6A1-201ENST00000361866 ARHGEF2Q92974 986 aaKnown RBP15.19■□□□□ 0.02
COL6A1-201ENST00000361866 TRIM7Q9C029 511 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 VEZTQ9HBM0 779 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 PPLO60437 1756 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 IFNB1P01574 187 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 FGGP02679 453 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 UBXN2AP68543 259 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 EARS2Q5JPH6 523 aaKnown RBP15.19■□□□□ 0.02
COL6A1-201ENST00000361866 ADAMTS13Q76LX8 1427 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 TBC1D1Q86TI0 1168 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-201ENST00000361866 OR2W6PQ8NHA6 318 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 TMEM47Q9BQJ4 181 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 SYNCQ9H7C4 482 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 RIC8AQ9NPQ8 531 aa15.19■□□□□ 0.02
COL6A1-201ENST00000361866 RBM12Q9NTZ6 932 aaKnown RBP15.19■□□□□ 0.02
COL6A1-201ENST00000361866 RIMBP3CA6NJZ7 1639 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 RIMBP3BA6NNM3 1639 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 RIMBP3Q9UFD9 1639 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 LOC102724159A0A0B4J2E5 919 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 ALDH3A1P30838 453 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 CARSP49589 748 aaKnown RBP15.18■□□□□ 0.02
COL6A1-201ENST00000361866 PWP2Q15269 919 aaKnown RBP15.18■□□□□ 0.02
COL6A1-201ENST00000361866 PPM1KQ8N3J5 372 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 N4BP2L2Q92802 583 aaPredicted RBP15.18■□□□□ 0.02
COL6A1-201ENST00000361866 TRIM9Q9C026 710 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 MLXIPLQ9NP71 852 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 HOMER3Q9NSC5 361 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 TBK1Q9UHD2 729 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 SALL1Q9NSC2 1324 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 GCKP35557 465 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 MAGOHP61326 146 aaKnown RBP15.18■□□□□ 0.02
COL6A1-201ENST00000361866 WHAMMQ8TF30 809 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 CELF1Q92879 486 aaKnown RBP15.18■□□□□ 0.02
COL6A1-201ENST00000361866 HDAC9Q9UKV0 1011 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 SNX24Q9Y343 169 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 XDHP47989 1333 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 A0A1W2PQC6 194 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 SNX1Q13596 522 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 FAM178BQ8IXR5 827 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 PSD3Q9NYI0 1048 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 USP21Q9UK80 565 aa15.18■□□□□ 0.02
COL6A1-201ENST00000361866 E9PMD0 336 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 BCRP11274 1271 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 THOC1Q96FV9 657 aaKnown RBP15.17■□□□□ 0.02
COL6A1-201ENST00000361866 FMO2Q99518 471 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 BRIP1Q9BX63 1249 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 GCNT4Q9P109 453 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 RNF14Q9UBS8 474 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 CCNL1Q9UK58 526 aaPredicted RBP15.17■□□□□ 0.02
COL6A1-201ENST00000361866 ABL1P00519 1130 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 ELAC2Q9BQ52 826 aaKnown RBP15.17■□□□□ 0.02
COL6A1-201ENST00000361866 USP40Q9NVE5 1235 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 STK17AQ9UEE5 414 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 KDM3AQ9Y4C1 1321 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 USP32Q8NFA0 1604 aa15.17■□□□□ 0.02
COL6A1-201ENST00000361866 ECM2O94769 699 aaPredicted RBP15.17■□□□□ 0.02
COL6A1-201ENST00000361866 TRIM28Q13263 835 aaKnown RBP15.17■□□□□ 0.02
COL6A1-201ENST00000361866 ZNF211Q13398 564 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms