RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 FBXL5Q9UKA1 691 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 MYH10P35580 1976 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 KIF3CO14782 793 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 PCK1P35558 622 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 HSD17B3P37058 310 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 TXKP42681 527 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 MEX3CQ5U5Q3 659 aaKnown RBP13.94□□□□□ -0.18
VAMP1-201ENST00000361716 GIGYF2Q6Y7W6 1299 aaKnown RBP13.94□□□□□ -0.18
VAMP1-201ENST00000361716 BZW1Q7L1Q6 419 aaKnown RBP13.94□□□□□ -0.18
VAMP1-201ENST00000361716 YTHDF3Q7Z739 585 aaKnown RBP13.94□□□□□ -0.18
VAMP1-201ENST00000361716 PIGBQ92521 554 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 MTMR8Q96EF0 704 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 TCP11L1Q9NUJ3 509 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 SALL4Q9UJQ4 1053 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 PCDH11XQ9BZA7 1347 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 PCDH11YQ9BZA8 1340 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 TRIM37O94972 964 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 TECP42680 631 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 PPP2R2AP63151 447 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 IRF2BP1Q8IU81 584 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 SPICE1Q8N0Z3 855 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 AGAP11Q8TF27 550 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 DDX47Q9H0S4 455 aaKnown RBP13.93□□□□□ -0.18
VAMP1-201ENST00000361716 PANK4Q9NVE7 773 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 CNOT8Q9UFF9 292 aaKnown RBP13.93□□□□□ -0.18
VAMP1-201ENST00000361716 SAP30BPQ9UHR5 308 aaKnown RBP13.93□□□□□ -0.18
VAMP1-201ENST00000361716 THRAP3Q9Y2W1 955 aaKnown RBP13.93□□□□□ -0.18
VAMP1-201ENST00000361716 ADAMTS3O15072 1205 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 TNNC1P63316 161 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 PLCB4Q15147 1175 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 CCDC155Q8N6L0 562 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 PNMA2Q9UL42 364 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 LRRC53A6NM62 1247 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 NKRFO15226 690 aaKnown RBP eCLIP13.93□□□□□ -0.18
VAMP1-201ENST00000361716 CCNT1O60563 726 aaKnown RBP13.93□□□□□ -0.18
VAMP1-201ENST00000361716 FCER1AP12319 257 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 SSR1P43307 286 aaKnown RBP13.93□□□□□ -0.18
VAMP1-201ENST00000361716 SPTY2D1Q68D10 685 aaPredicted RBP13.93□□□□□ -0.18
VAMP1-201ENST00000361716 RUFY4Q6ZNE9 571 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 ADGRA1Q86SQ6 560 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 SPATA20Q8TB22 786 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 PPP1R12CQ9BZL4 782 aa13.93□□□□□ -0.18
VAMP1-201ENST00000361716 A8MUI8 341 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 DHX9Q08211 1270 aaKnown RBP13.92□□□□□ -0.18
VAMP1-201ENST00000361716 ADCY1Q08828 1119 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 TAF11Q15544 211 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 GLE1Q53GS7 698 aaKnown RBP13.92□□□□□ -0.18
VAMP1-201ENST00000361716 CAVIN4Q5BKX8 364 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 CEP120Q8N960 986 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 CAVIN3Q969G5 261 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 NOP53Q9NZM5 478 aaKnown RBP13.92□□□□□ -0.18
VAMP1-201ENST00000361716 ARHGAP20Q9P2F6 1191 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 EIF6P56537 245 aaKnown RBP13.92□□□□□ -0.18
VAMP1-201ENST00000361716 SRBD1Q8N5C6 995 aaKnown RBP13.92□□□□□ -0.18
VAMP1-201ENST00000361716 MTRQ99707 1265 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 TLR10Q9BXR5 811 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 RNF26Q9BY78 433 aaPredicted RBP13.92□□□□□ -0.18
VAMP1-201ENST00000361716 EPHB6O15197 1021 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 KCNJ2P63252 427 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 MXRA7P84157 204 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 SOGA3Q5TF21 947 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 PPP4R3AQ6IN85 833 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 PTF1AQ7RTS3 328 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 UBA5Q9GZZ9 404 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 C15orf41Q9Y2V0 281 aa13.92□□□□□ -0.18
VAMP1-201ENST00000361716 DAPK3O43293 454 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 KCNQ2O43526 872 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 TRAPPC3O43617 180 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 MMEP08473 750 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 SCG2P13521 617 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 ARID4AP29374 1257 aaPredicted RBP13.91□□□□□ -0.18
VAMP1-201ENST00000361716 CACNB1Q02641 598 aaPredicted RBP13.91□□□□□ -0.18
VAMP1-201ENST00000361716 DRP2Q13474 957 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 LRRC14Q15048 493 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 CDC37Q16543 378 aaPredicted RBP13.91□□□□□ -0.18
VAMP1-201ENST00000361716 CCDC38Q502W7 563 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 NELFCDQ8IXH7 590 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 SLC17A8Q8NDX2 589 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.91□□□□□ -0.18
VAMP1-201ENST00000361716 DYNLL2Q96FJ2 89 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 TMBIM4Q9HC24 238 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 MAP3K15Q6ZN16 1313 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 NAPAP54920 295 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 TFAP4Q01664 338 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 CHRNDQ07001 517 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 RAPGEF1Q13905 1077 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 PIK3R5Q8WYR1 880 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 KLHL29Q96CT2 875 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 ETAA1Q9NY74 926 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 CACNA1FO60840 1977 aa13.91□□□□□ -0.18
VAMP1-201ENST00000361716 RTL9Q8NET4 1388 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 LRRC10BA6NIK2 292 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 CCT8L1PA6NM43 557 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 H0Y3Z8 333 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 RTN2O75298 545 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 KRT18P05783 430 aaKnown RBP13.9□□□□□ -0.18
VAMP1-201ENST00000361716 KIF5BP33176 963 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 RBM5P52756 815 aaKnown RBP eCLIP13.9□□□□□ -0.18
VAMP1-201ENST00000361716 POLE2P56282 527 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 KIAA0753Q2KHM9 967 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms