RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 C7orf31Q8N865 590 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 OTUD5Q96G74 571 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 FAM84BQ96KN1 310 aaPredicted RBP20.28■□□□□ 0.84
CLIP2-202ENST00000361545 R3HDM1Q15032 1099 aaKnown RBP20.28■□□□□ 0.84
CLIP2-202ENST00000361545 SP8Q8IXZ3 490 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 BHMT2Q9H2M3 363 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 SNX25Q9H3E2 840 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 EMILIN3Q9NT22 766 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 PPP2R2CQ9Y2T4 447 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 SPDYE16A6NNV3 312 aaPredicted RBP20.28■□□□□ 0.84
CLIP2-202ENST00000361545 ZBTB5O15062 677 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 AFPP02771 609 aaKnown RBP20.28■□□□□ 0.84
CLIP2-202ENST00000361545 SPDYE2Q495Y8 402 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 CYB5R4Q7L1T6 521 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 TMEM206Q9H813 350 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 USP17L15C9J2P7 530 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 USP17L13C9JLJ4 530 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 USP17L11C9JVI0 530 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 USP17L18D6R9N7 530 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 USP17L22D6RA61 530 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 USP17L17D6RBQ6 530 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 USP17L19D6RCP7 530 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 USP17L20D6RJB6 530 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 ADCY8P40145 1251 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 USP17L24Q0WX57 530 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 USP17L6PQ6QN14 398 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 AFG3L2Q9Y4W6 797 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 USP17L10C9JJH3 530 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 HHATQ5VTY9 493 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 TAOK1Q7L7X3 1001 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 PCDHA6Q9UN73 950 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 PCDHA8Q9Y5H6 950 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 MYL3P08590 195 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 FKBP3Q00688 224 aaKnown RBP20.27■□□□□ 0.84
CLIP2-202ENST00000361545 NFX1Q12986 1120 aaKnown RBP20.27■□□□□ 0.84
CLIP2-202ENST00000361545 RC3H1Q5TC82 1133 aaKnown RBP20.27■□□□□ 0.84
CLIP2-202ENST00000361545 ZNF658Q5TYW1 1059 aaPredicted RBP20.27■□□□□ 0.84
CLIP2-202ENST00000361545 RAB17Q9H0T7 212 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 ANAPC4Q9UJX5 808 aa20.27■□□□□ 0.84
CLIP2-202ENST00000361545 SFI1A8K8P3 1242 aa20.27■□□□□ 0.83
CLIP2-202ENST00000361545 BPIFB4P59827 614 aa20.27■□□□□ 0.83
CLIP2-202ENST00000361545 FOXO4P98177 505 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 RASSF7Q02833 373 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 METTL23Q86XA0 190 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 GOLGA6BA6NDN3 693 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 GUCY2FP51841 1108 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 FYB2Q5VWT5 728 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 CAPN12Q6ZSI9 719 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 PALM2Q8IXS6 379 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 RABEP2Q9H5N1 569 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 HYOU1Q9Y4L1 999 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 MNAT1P51948 309 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 CUL4AQ13619 759 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 MESDQ14696 234 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 PIGOQ8TEQ8 1089 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 RIC8AQ9NPQ8 531 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 MAN1B1Q9UKM7 699 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 SRPRBQ9Y5M8 271 aaKnown RBP20.26■□□□□ 0.83
CLIP2-202ENST00000361545 EPN1Q9Y6I3 576 aaPredicted RBP20.26■□□□□ 0.83
CLIP2-202ENST00000361545 NAA35Q5VZE5 725 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 VPS52Q8N1B4 723 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.26■□□□□ 0.83
CLIP2-202ENST00000361545 AFAP1L1Q8TED9 768 aa20.26■□□□□ 0.83
CLIP2-202ENST00000361545 GOLGA8IPA6NC78 632 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 GOLGA8JA6NMD2 632 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 GOLGA8FQ08AF8 430 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 GOLGA8DPQ0D2H9 430 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 SF3A3Q12874 501 aaKnown RBP eCLIP20.25■□□□□ 0.834e-6■■□□□ 11.7
CLIP2-202ENST00000361545 CACTINQ8WUQ7 758 aaKnown RBP20.25■□□□□ 0.83
CLIP2-202ENST00000361545 RCOR1Q9UKL0 485 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 PLEKHG2Q9H7P9 1386 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 GOLGA6CA6NDK9 693 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 IGSF3O75054 1194 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 GOLGA6DP0CG33 693 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 MTMR1Q13613 665 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 PDZD4Q76G19 769 aaPredicted RBP20.25■□□□□ 0.83
CLIP2-202ENST00000361545 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.25■□□□□ 0.833e-6■■■■□ 26.6
CLIP2-202ENST00000361545 GOLGA6AQ9NYA3 693 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 USP31Q70CQ4 1352 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 GMNNO75496 209 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 C4orf50Q6ZRC1 276 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 ENAHQ8N8S7 591 aaPredicted RBP20.25■□□□□ 0.83
CLIP2-202ENST00000361545 RUFY4Q6ZNE9 571 aa20.25■□□□□ 0.83
CLIP2-202ENST00000361545 APOBEC3FQ8IUX4 373 aaKnown RBP20.25■□□□□ 0.83
CLIP2-202ENST00000361545 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.25■□□□□ 0.83
CLIP2-202ENST00000361545 A6NJR5 290 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 GOLGA8SH3BPF8 625 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 MYO1FO00160 1098 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 KRT12Q99456 494 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 FEM1BQ9UK73 627 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 CD58P19256 250 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 STXBP2Q15833 593 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 DPH5Q9H2P9 285 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 SPON1Q9HCB6 807 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 EEF1GP26641 437 aaKnown RBP20.24■□□□□ 0.83
CLIP2-202ENST00000361545 KRT71Q3SY84 523 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 DENND2CQ68D51 928 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 C11orf57Q6ZUT1 292 aaPredicted RBP20.24■□□□□ 0.83
CLIP2-202ENST00000361545 MRFAP1L1Q96HT8 127 aa20.24■□□□□ 0.83
CLIP2-202ENST00000361545 K7ERI5 159 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms