RNA–Protein interactions for RNA: ENST00000361543.3

SGMS1-201, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best) BASIC

Gene SGMS1, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-201ENST00000361543 TRMT13Q9NUP7 481 aaKnown RBP8.83□□□□□ -1
SGMS1-201ENST00000361543 RBM28Q9NW13 759 aaKnown RBP8.83□□□□□ -1
SGMS1-201ENST00000361543 DDX41Q9UJV9 622 aaKnown RBP8.83□□□□□ -1
SGMS1-201ENST00000361543 UMODL1Q5DID0 1318 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 KLF18A0A0U1RQI7 1052 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 hCG_1642624A0A1W2PR95 340 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 GOLGA8AA7E2F4 631 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 GOLGA8BA8MQT2 603 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 PIK3CDO00329 1044 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 MEIS2O14770 477 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 SUPT20HL2P0C7V6 817 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 ZNF286BP0CG31 522 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 CSF2RAP15509 400 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 UBA1P22314 1058 aaKnown RBP8.82□□□□□ -1
SGMS1-201ENST00000361543 HSPA4P34932 840 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 CHMP4BP1P59074 171 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 FGD1P98174 961 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 LAMC2Q13753 1193 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 DGKDQ16760 1214 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 RTN1Q16799 776 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 GNPTABQ3T906 1256 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 PSRC1Q6PGN9 363 aaPredicted RBP8.82□□□□□ -1
SGMS1-201ENST00000361543 USP17L6PQ6QN14 398 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 HEATR3Q7Z4Q2 680 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 DHX37Q8IY37 1157 aaKnown RBP8.82□□□□□ -1
SGMS1-201ENST00000361543 PPTC7Q8NI37 304 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 PPP1R13LQ8WUF5 828 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 GPKOWQ92917 476 aaPredicted RBP eCLIP8.82□□□□□ -1
SGMS1-201ENST00000361543 KCNB2Q92953 911 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 RNF25Q96BH1 459 aaPredicted RBP8.82□□□□□ -1
SGMS1-201ENST00000361543 ZFP91Q96JP5 570 aaPredicted RBP8.82□□□□□ -1
SGMS1-201ENST00000361543 JAKMIP1Q96N16 626 aaKnown RBP8.82□□□□□ -1
SGMS1-201ENST00000361543 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.82□□□□□ -1
SGMS1-201ENST00000361543 WNT8AQ9H1J5 351 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 BRPF3Q9ULD4 1205 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 SNX14Q9Y5W7 946 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 PTPRSQ13332 1948 aa8.82□□□□□ -1
SGMS1-201ENST00000361543 SPTBN5Q9NRC6 3674 aaKnown RBP8.81□□□□□ -1
SGMS1-201ENST00000361543 PITPNM1O00562 1244 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 SORBS3O60504 671 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 STAM2O75886 525 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 GGPS1O95749 300 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 F2P00734 622 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 ACRP10323 421 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 TGFB3P10600 412 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 CYP2C9P11712 490 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 HOXD8P13378 290 aaPredicted RBP8.81□□□□□ -1
SGMS1-201ENST00000361543 CPA1P15085 419 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 CASTP20810 708 aaKnown RBP8.81□□□□□ -1
SGMS1-201ENST00000361543 RCAN1P53805 252 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 CCL23P55773 120 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 MRPS9P82933 396 aaKnown RBP8.81□□□□□ -1
SGMS1-201ENST00000361543 SMAD3P84022 425 aaKnown RBP8.81□□□□□ -1
SGMS1-201ENST00000361543 SP2Q02086 613 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 PTPN11Q06124 597 aaPredicted RBP8.81□□□□□ -1
SGMS1-201ENST00000361543 UBE2SQ16763 222 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 TMEM240Q5SV17 173 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 CELF3Q5SZQ8 465 aaKnown RBP8.81□□□□□ -1
SGMS1-201ENST00000361543 MYSM1Q5VVJ2 828 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 PCNX4Q63HM2 1172 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 WWC2Q6AWC2 1192 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 FAM109BQ6ICB4 259 aaPredicted RBP8.81□□□□□ -1
SGMS1-201ENST00000361543 BLOC1S2Q6QNY1 142 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 SPATA33Q96N06 139 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 INPP4AQ96PE3 977 aaPredicted RBP8.81□□□□□ -1
SGMS1-201ENST00000361543 KATNAL1Q9BW62 490 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 PSTPIP2Q9H939 334 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 IL23AQ9NPF7 189 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 NAP1L2Q9ULW6 460 aaPredicted RBP8.81□□□□□ -1
SGMS1-201ENST00000361543 NOD1Q9Y239 953 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 NID2Q14112 1375 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 KAT6AQ92794 2004 aa8.81□□□□□ -1
SGMS1-201ENST00000361543 SPDYE3A6NKU9 549 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 FIBPO43427 364 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 RPS6KB1P23443 525 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 PSEN2P49810 448 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 METAP2P50579 478 aaKnown RBP eCLIP8.8□□□□□ -1
SGMS1-201ENST00000361543 NAPAP54920 295 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 APOBRQ0VD83 1088 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 FUT2Q10981 343 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 HSDL1Q3SXM5 330 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 ZNF697Q5TEC3 545 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 PPP1R18Q6NYC8 613 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 XRRA1Q6P2D8 792 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 Q6ZUG5 572 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 ZNF365Q70YC5 407 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 C16orf59Q7L2K0 433 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 KAT2BQ92831 832 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 BRF1Q92994 677 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 SCLYQ96I15 445 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 MLXIPQ9HAP2 919 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 MTMR10Q9NXD2 777 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 STK24Q9Y6E0 443 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 TET1Q8NFU7 2136 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 SIP14410 1827 aa8.8□□□□□ -1
SGMS1-201ENST00000361543 SPATA31C2B4DYI2 1134 aa8.79□□□□□ -1
SGMS1-201ENST00000361543 hCG_1984214I3L0E3 225 aa8.79□□□□□ -1
SGMS1-201ENST00000361543 NOP56O00567 594 aaKnown RBP8.79□□□□□ -1
SGMS1-201ENST00000361543 PPFIA4O75335 1185 aa8.79□□□□□ -1
SGMS1-201ENST00000361543 PYGBP11216 843 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms