RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SLC4A4Q9Y6R1 1079 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 GUCY1A2P33402 732 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 GGCXP38435 758 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 SYKP43405 635 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 LIG3P49916 1009 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 TBC1D8BQ0IIM8 1120 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 TTBK2Q6IQ55 1244 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 ADGRA1Q86SQ6 560 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 ELOA2Q8IYF1 753 aaPredicted RBP8.34□□□□□ -1.07
CLCN3-202ENST00000360642 OSMRQ99650 979 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 HSD3B7Q9H2F3 369 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 IMPACTQ9P2X3 320 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 MAPK8IP1Q9UQF2 711 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 IKBKBO14920 756 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 MMP1P03956 469 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 HSD3B2P26439 372 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 TMTC2Q8N394 836 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 WASF1Q92558 559 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 ACSBG1Q96GR2 724 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 SLC26A6Q9BXS9 759 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 ANAPC4Q9UJX5 808 aa8.34□□□□□ -1.07
CLCN3-202ENST00000360642 FNDC3AQ9Y2H6 1198 aaKnown RBP8.34□□□□□ -1.07
CLCN3-202ENST00000360642 A0A1B0GUL6 1792 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 CUTAO60888 179 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 COL5A3P25940 1745 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 TDO2P48775 406 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 TOB1P50616 345 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 PTPN11Q06124 597 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 TRIM29Q14134 588 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 CLEC4GQ6UXB4 293 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 NOSTRINQ8IVI9 506 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 RNF217Q8TC41 542 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 C16orf45Q96MC5 204 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 LGR4Q9BXB1 951 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 GPN3Q9UHW5 284 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 SMTNL1A8MU46 457 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 SKILP12757 684 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 TNNT1P13805 278 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 NFKB1P19838 968 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 GARTP22102 1010 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 RPIAP49247 311 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 GYS2P54840 703 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 GSDMDP57764 484 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 PPARAQ07869 468 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 WTAPQ15007 396 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 RNF187Q5TA31 235 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 C1orf53Q5VUE5 145 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 STK11IPQ8N1F8 1099 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 CRACR2BQ8N4Y2 399 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 GRIN3AQ8TCU5 1115 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 CLIC6Q96NY7 704 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 TCF12Q99081 682 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 CDC5LQ99459 802 aaKnown RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 LIN7BQ9HAP6 207 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 LRP2BPQ9P2M1 347 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 PCDHB10Q9UN67 800 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 CD2APQ9Y5K6 639 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 ZNF831Q5JPB2 1677 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 BIN1O00499 593 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 SART3Q15020 963 aaKnown RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 SF3B3Q15393 1217 aaKnown RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 SEC23AQ15436 765 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 ZRSR1Q15695 479 aaKnown RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 GLIPR1L2Q4G1C9 344 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 MIGA1Q8NAN2 632 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 RIOK1Q9BRS2 568 aaKnown RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 SRRTQ9BXP5 876 aaKnown RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 XPO4Q9C0E2 1151 aaKnown RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 FOXP1Q9H334 677 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 RNF41Q9H4P4 317 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 PAXBP1Q9Y5B6 917 aa8.33□□□□□ -1.08
CLCN3-202ENST00000360642 GOLGB1Q14789 3259 aaKnown RBP8.33□□□□□ -1.08
CLCN3-202ENST00000360642 COL1A1P02452 1464 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-202ENST00000360642 SPATA31A5Q5VU36 1347 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 SPATA31A7Q8IWB4 1347 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 CACNA1SQ13698 1873 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 USP27XA6NNY8 438 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 BTBD18B2RXH4 712 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 ATP11AP98196 1134 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 CBX2Q14781 532 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-202ENST00000360642 TPD52L1Q16890 204 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-202ENST00000360642 FOXP4Q8IVH2 680 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-202ENST00000360642 FANCBQ8NB91 859 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 STK35Q8TDR2 534 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 ANKRD7Q92527 254 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 DEXIO95424 95 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 RARAP10276 462 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 CYP7A1P22680 504 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 MSX1P28360 303 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 UBE4AQ14139 1066 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 LONRF3Q496Y0 759 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 TTC39BQ5VTQ0 682 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-202ENST00000360642 PCNX4Q63HM2 1172 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 KRBA2Q6ZNG9 492 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 FERD3LQ96RJ6 166 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 BSDC1Q9NW68 430 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-202ENST00000360642 IFNKQ9P0W0 207 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 KCNH3Q9ULD8 1083 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 ZNF652Q9Y2D9 606 aa8.32□□□□□ -1.08
CLCN3-202ENST00000360642 CCDC196A0A1B0GTZ2 297 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms