RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 EHHADHQ08426 723 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 RPS6KA1Q15418 735 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 ARHGEF18Q6ZSZ5 1173 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.56□□□□□ -0.72
CHD3-202ENST00000358181 CHCHD3Q9NX63 227 aaKnown RBP10.56□□□□□ -0.72
CHD3-202ENST00000358181 FARP1Q9Y4F1 1045 aaPredicted RBP10.56□□□□□ -0.72
CHD3-202ENST00000358181 ALDH1L1O75891 902 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 INHBAP08476 426 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 IRF1P10914 325 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 U2AF2P26368 475 aaKnown RBP eCLIP10.56□□□□□ -0.72
CHD3-202ENST00000358181 SYCE1Q8N0S2 351 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 PNMA6EA0A0J9YXQ4 647 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 F8W8V4 182 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 GUCA1CO95843 209 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 DCAF15Q66K64 600 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 RNF207Q6ZRF8 634 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 PATL1Q86TB9 770 aaKnown RBP10.56□□□□□ -0.72
CHD3-202ENST00000358181 DDX42Q86XP3 938 aaKnown RBP eCLIP10.56□□□□□ -0.72
CHD3-202ENST00000358181 KCTD6Q8NC69 237 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 KCNJ14Q9UNX9 436 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 MAP3K1Q13233 1512 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 WDR91A4D1P6 747 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 GADD45BO75293 160 aaPredicted RBP10.56□□□□□ -0.72
CHD3-202ENST00000358181 EPB42P16452 691 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 RFX3P48380 749 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 FBXO11Q86XK2 927 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 CATSPER3Q86XQ3 398 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 NELFBQ8WX92 580 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 NAF1Q96HR8 494 aaKnown RBP10.56□□□□□ -0.72
CHD3-202ENST00000358181 IWS1Q96ST2 819 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 BCL2L14Q9BZR8 327 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 AMFRQ9UKV5 643 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 USP19O94966 1318 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 HDAC1Q13547 482 aaPredicted RBP10.56□□□□□ -0.72
CHD3-202ENST00000358181 TNFAIP1Q13829 316 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 TNNI3KQ59H18 835 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 DARS2Q6PI48 645 aaKnown RBP10.56□□□□□ -0.72
CHD3-202ENST00000358181 FPGT-TNNI3KV9GXZ4 949 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 INPP5BP32019 993 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 TECP42680 631 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 ZAP70P43403 619 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 GPR1P46091 355 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 RRM2BQ7LG56 351 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 KRT77Q7Z794 578 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 NBPF15Q8N660 670 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 C10orf53Q8N6V4 93 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 FBXO18Q8NFZ0 1043 aa10.56□□□□□ -0.72
CHD3-202ENST00000358181 HEXIM2Q96MH2 286 aaKnown RBP10.56□□□□□ -0.72
CHD3-202ENST00000358181 TMCC1O94876 653 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 CD58P19256 250 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 VCAM1P19320 739 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 CHMLP26374 656 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 TFAMQ00059 246 aaKnown RBP10.55□□□□□ -0.72
CHD3-202ENST00000358181 PAK1Q13153 545 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 ASIC4Q96FT7 647 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 SYCE1LA8MT33 242 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 KCNK3O14649 394 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 XPOTO43592 962 aaKnown RBP10.55□□□□□ -0.72
CHD3-202ENST00000358181 ZMYND10O75800 440 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 HSPA1AP0DMV8 641 aaKnown RBP10.55□□□□□ -0.72
CHD3-202ENST00000358181 HSPA1BP0DMV9 641 aaKnown RBP10.55□□□□□ -0.72
CHD3-202ENST00000358181 KRT71Q3SY84 523 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 PRR23CQ6ZRP0 262 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 B4GALNT4Q76KP1 1039 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 TAS2R42Q7RTR8 314 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 PAWRQ96IZ0 340 aaKnown RBP10.55□□□□□ -0.72
CHD3-202ENST00000358181 PAPOLBQ9NRJ5 636 aaKnown RBP10.55□□□□□ -0.72
CHD3-202ENST00000358181 TLK1Q9UKI8 766 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 RIPOR2Q9Y4F9 1068 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 UNC13AQ9UPW8 1703 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 SMCO2A6NFE2 343 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 SRGAP2CP0DJJ0 459 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 PPP3CCP48454 512 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 WHAMMP3Q1A5X7 153 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 SLC10A4Q96EP9 437 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 ZNF212Q9UDV6 495 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 STRIP2Q9ULQ0 834 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 A0A1B0GUA9 196 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 E5RI56 91 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 RNF40O75150 1001 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 PEX19P40855 299 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 MAIP1Q8WWC4 291 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 CCDC90BQ9GZT6 254 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 DUOX2Q9NRD8 1548 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 ARHGAP10A1A4S6 786 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 MOCS3O95396 460 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 CLCN1P35523 988 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 NOLC1Q14978 699 aaKnown RBP eCLIP10.55□□□□□ -0.721e-49■■■■■ 70.7
CHD3-202ENST00000358181 TRIM60Q495X7 471 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 EGFL8Q99944 293 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 YTHDC2Q9H6S0 1430 aaKnown RBP10.55□□□□□ -0.72
CHD3-202ENST00000358181 FAN1Q9Y2M0 1017 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 SETD1BQ9UPS6 1966 aaKnown RBP10.55□□□□□ -0.72
CHD3-202ENST00000358181 CAPN1P07384 714 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 CARSP49589 748 aaKnown RBP10.55□□□□□ -0.72
CHD3-202ENST00000358181 ANO1Q5XXA6 986 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 TEKT3Q9BXF9 490 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 TPCN1Q9ULQ1 816 aa10.55□□□□□ -0.72
CHD3-202ENST00000358181 P4HA2O15460 535 aa10.54□□□□□ -0.72
CHD3-202ENST00000358181 SKIP12755 728 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms