RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 SIX6OS1Q8N1H7 587 aa11.97□□□□□ -0.49
FN1-205ENST00000357867 PUS3Q9BZE2 481 aaKnown RBP11.97□□□□□ -0.49
FN1-205ENST00000357867 GTPBP6O43824 516 aaPredicted RBP11.97□□□□□ -0.49
FN1-205ENST00000357867 SNAPC2Q13487 334 aa11.97□□□□□ -0.49
FN1-205ENST00000357867 CCDC121Q6ZUS5 278 aa11.97□□□□□ -0.49
FN1-205ENST00000357867 MAP3K20Q9NYL2 800 aaKnown RBP11.97□□□□□ -0.49
FN1-205ENST00000357867 ABCB4P21439 1286 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 GBP1P32455 592 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 GARSP41250 739 aaKnown RBP11.96□□□□□ -0.49
FN1-205ENST00000357867 STK17AQ9UEE5 414 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 CEP104O60308 925 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 LDHAP00338 332 aaKnown RBP11.96□□□□□ -0.49
FN1-205ENST00000357867 MYL1P05976 194 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 TSPY1Q01534 308 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 ME3Q16798 604 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 FAM26FQ5R3K3 315 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 TTBK2Q6IQ55 1244 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 CATSPER4Q7RTX7 472 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 RBM46Q8TBY0 533 aaKnown RBP11.96□□□□□ -0.49
FN1-205ENST00000357867 U2AF1L4Q8WU68 220 aaKnown RBP11.96□□□□□ -0.49
FN1-205ENST00000357867 MRRFQ96E11 262 aaKnown RBP11.96□□□□□ -0.49
FN1-205ENST00000357867 RUNDC3BQ96NL0 473 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 NLRC4Q9NPP4 1024 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 HPCAL4Q9UM19 191 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 PNOCQ13519 176 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 RUFY4Q6ZNE9 571 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 STMN2Q93045 179 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 ADD1P35611 737 aaKnown RBP11.96□□□□□ -0.49
FN1-205ENST00000357867 RECQLP46063 649 aaPredicted RBP11.96□□□□□ -0.49
FN1-205ENST00000357867 BFSP1Q12934 665 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 CCDC51Q96ER9 411 aa11.96□□□□□ -0.49
FN1-205ENST00000357867 FAM49AQ9H0Q0 323 aaPredicted RBP11.96□□□□□ -0.49
FN1-205ENST00000357867 NNMTP40261 264 aa11.96□□□□□ -0.5
FN1-205ENST00000357867 NUMA1Q14980 2115 aa11.96□□□□□ -0.5
FN1-205ENST00000357867 TICAM2Q86XR7 235 aa11.96□□□□□ -0.5
FN1-205ENST00000357867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.96□□□□□ -0.5
FN1-205ENST00000357867 KATNAL1Q9BW62 490 aa11.96□□□□□ -0.5
FN1-205ENST00000357867 MYSM1Q5VVJ2 828 aa11.96□□□□□ -0.5
FN1-205ENST00000357867 PNMA8AQ86V59 439 aaPredicted RBP11.96□□□□□ -0.5
FN1-205ENST00000357867 ZSWIM6Q9HCJ5 1215 aa11.96□□□□□ -0.5
FN1-205ENST00000357867 ARHGEF40Q8TER5 1519 aa11.96□□□□□ -0.5
FN1-205ENST00000357867 TBCKQ8TEA7 893 aa11.96□□□□□ -0.5
FN1-205ENST00000357867 ZNRF3Q9ULT6 936 aa11.96□□□□□ -0.5
FN1-205ENST00000357867 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.5
FN1-205ENST00000357867 A6NNZ2 444 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 TUBB8Q3ZCM7 444 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 CDKL2Q92772 493 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 GJA10Q969M2 543 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 FAM149B1Q96BN6 582 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 TDRD3Q9H7E2 651 aaKnown RBP11.95□□□□□ -0.5
FN1-205ENST00000357867 DBNLQ9UJU6 430 aaKnown RBP11.95□□□□□ -0.5
FN1-205ENST00000357867 MADDQ8WXG6 1647 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 TNPO2O14787 897 aaKnown RBP11.95□□□□□ -0.5
FN1-205ENST00000357867 IFNB1P01574 187 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 KRT15P19012 456 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 SNRNP48Q6IEG0 339 aaKnown RBP11.95□□□□□ -0.5
FN1-205ENST00000357867 TRIM58Q8NG06 486 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 STAMQ92783 540 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 EIF2AK2P19525 551 aaKnown RBP11.95□□□□□ -0.5
FN1-205ENST00000357867 MTMR3Q13615 1198 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 SH3RF3Q8TEJ3 882 aaPredicted RBP11.95□□□□□ -0.5
FN1-205ENST00000357867 SCYL1Q96KG9 808 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 RRP9O43818 475 aaKnown RBP11.95□□□□□ -0.5
FN1-205ENST00000357867 TSTA3Q13630 321 aaPredicted RBP11.95□□□□□ -0.5
FN1-205ENST00000357867 HHATQ5VTY9 493 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 CD209Q9NNX6 404 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 SLC39A2Q9NP94 309 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 FAM76AQ8TAV0 307 aa11.95□□□□□ -0.5
FN1-205ENST00000357867 PARK7Q99497 189 aaKnown RBP11.95□□□□□ -0.5
FN1-205ENST00000357867 ATP2C2O75185 946 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 LONRF2Q1L5Z9 754 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 C8orf34Q49A92 452 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 KAZNQ674X7 775 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 MCPH1Q8NEM0 835 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 SYMPKQ92797 1274 aaKnown RBP11.94□□□□□ -0.5
FN1-205ENST00000357867 CPDO75976 1380 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 ARHGAP6O43182 974 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 ZNF18P17022 549 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 FAM83BQ5T0W9 1011 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 YAF2Q8IY57 180 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 C10orf67Q8IYJ2 551 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 CNOT7Q9UIV1 285 aaKnown RBP11.94□□□□□ -0.5
FN1-205ENST00000357867 HLFQ16534 295 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 MAPK6Q16659 721 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 NSUN6Q8TEA1 469 aaKnown RBP11.94□□□□□ -0.5
FN1-205ENST00000357867 MRPL47Q9HD33 250 aaKnown RBP11.94□□□□□ -0.5
FN1-205ENST00000357867 SH3GLB2Q9NR46 395 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 SERTAD1Q9UHV2 236 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 AP3B2Q13367 1082 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 BZW1Q7L1Q6 419 aaKnown RBP11.94□□□□□ -0.5
FN1-205ENST00000357867 SPATA31E1Q6ZUB1 1445 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 NR2F2P24468 414 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 KRT222Q8N1A0 295 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 PRPF38AQ8NAV1 312 aaKnown RBP11.94□□□□□ -0.5
FN1-205ENST00000357867 KIAA1468Q9P260 1216 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 ASB14A6NK59 587 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 OR8K1Q8NGG5 319 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 TTLL11Q8NHH1 800 aa11.94□□□□□ -0.5
FN1-205ENST00000357867 MYH9P35579 1960 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms