RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 MYMKA6NI61 221 aa26.13■■□□□ 1.77
NPAS3-203ENST00000357798 ACTN3Q08043 901 aaPredicted RBP26.13■■□□□ 1.77
NPAS3-203ENST00000357798 KCNMA1Q12791 1236 aa26.13■■□□□ 1.77
NPAS3-203ENST00000357798 SFMBT2Q5VUG0 894 aa26.13■■□□□ 1.77
NPAS3-203ENST00000357798 FBXO33Q7Z6M2 555 aa26.13■■□□□ 1.77
NPAS3-203ENST00000357798 TSG101Q99816 390 aa26.13■■□□□ 1.77
NPAS3-203ENST00000357798 BLOC1S4Q9NUP1 217 aa26.13■■□□□ 1.77
NPAS3-203ENST00000357798 CCDC87Q9NVE4 849 aa26.13■■□□□ 1.77
NPAS3-203ENST00000357798 WTIPA6NIX2 430 aaPredicted RBP26.12■■□□□ 1.77
NPAS3-203ENST00000357798 GRB10Q13322 594 aa26.12■■□□□ 1.77
NPAS3-203ENST00000357798 INTS5Q6P9B9 1019 aaKnown RBP26.12■■□□□ 1.77
NPAS3-203ENST00000357798 GPATCH11Q8N954 259 aa26.12■■□□□ 1.77
NPAS3-203ENST00000357798 RIC8AQ9NPQ8 531 aa26.12■■□□□ 1.77
NPAS3-203ENST00000357798 BSDC1Q9NW68 430 aaPredicted RBP26.12■■□□□ 1.77
NPAS3-203ENST00000357798 NIP7Q9Y221 180 aaKnown RBP eCLIP26.12■■□□□ 1.77
NPAS3-203ENST00000357798 PLAAQ9Y263 795 aa26.12■■□□□ 1.77
NPAS3-203ENST00000357798 TMC4Q7Z404 712 aa26.12■■□□□ 1.77
NPAS3-203ENST00000357798 GPIHBP1Q8IV16 184 aa26.12■■□□□ 1.77
NPAS3-203ENST00000357798 PROM2Q8N271 834 aa26.12■■□□□ 1.77
NPAS3-203ENST00000357798 C3orf20Q8ND61 904 aa26.12■■□□□ 1.77
NPAS3-203ENST00000357798 KAT6BQ8WYB5 2073 aa26.12■■□□□ 1.77
NPAS3-203ENST00000357798 PALM3A6NDB9 673 aaPredicted RBP26.12■■□□□ 1.77
NPAS3-203ENST00000357798 CES2O00748 559 aa26.12■■□□□ 1.77
NPAS3-203ENST00000357798 HDLBPQ00341 1268 aaKnown RBP26.12■■□□□ 1.77
NPAS3-203ENST00000357798 ATP2B2Q01814 1243 aa26.12■■□□□ 1.77
NPAS3-203ENST00000357798 FTCDO95954 541 aa26.11■■□□□ 1.77
NPAS3-203ENST00000357798 SMTNP53814 917 aa26.11■■□□□ 1.77
NPAS3-203ENST00000357798 C6orf89Q6UWU4 347 aa26.11■■□□□ 1.77
NPAS3-203ENST00000357798 TAF1DQ9H5J8 278 aaPredicted RBP26.11■■□□□ 1.77
NPAS3-203ENST00000357798 MCM9Q9NXL9 1143 aa26.11■■□□□ 1.77
NPAS3-203ENST00000357798 GOLGA6L10A6NI86 522 aa26.11■■□□□ 1.77
NPAS3-203ENST00000357798 NAPAP54920 295 aa26.11■■□□□ 1.77
NPAS3-203ENST00000357798 PSMD2Q13200 908 aa26.11■■□□□ 1.77
NPAS3-203ENST00000357798 CEP85LQ5SZL2 805 aa26.11■■□□□ 1.77
NPAS3-203ENST00000357798 MAATS1Q7Z4T9 603 aa26.11■■□□□ 1.77
NPAS3-203ENST00000357798 TACO1Q9BSH4 297 aaKnown RBP26.11■■□□□ 1.77
NPAS3-203ENST00000357798 ISCUQ9H1K1 167 aa26.11■■□□□ 1.77
NPAS3-203ENST00000357798 TMEM59LQ9UK28 342 aa26.11■■□□□ 1.77
NPAS3-203ENST00000357798 ATP6V0A2Q9Y487 856 aa26.11■■□□□ 1.77
NPAS3-203ENST00000357798 TLR2O60603 784 aa26.1■■□□□ 1.77
NPAS3-203ENST00000357798 RNF187Q5TA31 235 aaPredicted RBP26.1■■□□□ 1.77
NPAS3-203ENST00000357798 USP38Q8NB14 1042 aa26.1■■□□□ 1.77
NPAS3-203ENST00000357798 LARP4BQ92615 738 aaKnown RBP26.1■■□□□ 1.77
NPAS3-203ENST00000357798 CXorf56Q9H5V9 222 aa26.1■■□□□ 1.77
NPAS3-203ENST00000357798 C6orf50Q9HD87 102 aa26.1■■□□□ 1.77
NPAS3-203ENST00000357798 RAD51CO43502 376 aa26.1■■□□□ 1.77
NPAS3-203ENST00000357798 SEC24CP53992 1094 aa26.1■■□□□ 1.77
NPAS3-203ENST00000357798 C12orf60Q5U649 245 aa26.1■■□□□ 1.77
NPAS3-203ENST00000357798 SPZ1Q9BXG8 430 aa26.1■■□□□ 1.77
NPAS3-203ENST00000357798 POLD4Q9HCU8 107 aa26.1■■□□□ 1.77
NPAS3-203ENST00000357798 USP17L8P0C7I0 530 aa26.09■■□□□ 1.77
NPAS3-203ENST00000357798 KLRC1P26715 233 aa26.09■■□□□ 1.77
NPAS3-203ENST00000357798 GNA11P29992 359 aa26.09■■□□□ 1.77
NPAS3-203ENST00000357798 FAM83BQ5T0W9 1011 aa26.09■■□□□ 1.77
NPAS3-203ENST00000357798 PNMA5Q96PV4 448 aa26.09■■□□□ 1.77
NPAS3-203ENST00000357798 TANGO6Q9C0B7 1094 aa26.09■■□□□ 1.77
NPAS3-203ENST00000357798 MINPP1Q9UNW1 487 aa26.09■■□□□ 1.77
NPAS3-203ENST00000357798 ROBO3Q96MS0 1386 aa26.09■■□□□ 1.77
NPAS3-203ENST00000357798 SLC18A3Q16572 532 aa26.09■■□□□ 1.77
NPAS3-203ENST00000357798 NLRC4Q9NPP4 1024 aa26.09■■□□□ 1.77
NPAS3-203ENST00000357798 ATAD5Q96QE3 1844 aa26.09■■□□□ 1.77
NPAS3-203ENST00000357798 CHUKO15111 745 aa26.08■■□□□ 1.77
NPAS3-203ENST00000357798 NOL4O94818 638 aa26.08■■□□□ 1.77
NPAS3-203ENST00000357798 ATP6V1AP38606 617 aa26.08■■□□□ 1.77
NPAS3-203ENST00000357798 EHHADHQ08426 723 aa26.08■■□□□ 1.77
NPAS3-203ENST00000357798 CUL1Q13616 776 aa26.08■■□□□ 1.77
NPAS3-203ENST00000357798 LRRC27Q9C0I9 530 aa26.08■■□□□ 1.77
NPAS3-203ENST00000357798 ACTR5Q9H9F9 607 aaPredicted RBP26.08■■□□□ 1.77
NPAS3-203ENST00000357798 E7EVH7 732 aa26.08■■□□□ 1.77
NPAS3-203ENST00000357798 COL4A3BPQ9Y5P4 624 aa26.08■■□□□ 1.77
NPAS3-203ENST00000357798 TAF1P21675 1872 aa26.08■■□□□ 1.76
NPAS3-203ENST00000357798 CCDC40Q4G0X9 1142 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 CCDC13Q8IYE1 715 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 XIRP1Q702N8 1843 aaKnown RBP26.07■■□□□ 1.76
NPAS3-203ENST00000357798 SMCO2A6NFE2 343 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 RASSF9O75901 435 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 FXR2P51116 673 aaKnown RBP eCLIP26.07■■□□□ 1.76
NPAS3-203ENST00000357798 IFT88Q13099 833 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 DYMQ7RTS9 669 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 TAF4BQ92750 862 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 LRRC45Q96CN5 670 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 CYFIP2Q96F07 1278 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 BTNL10A8MVZ5 291 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 GCOM1H8Y6P7 765 aaPredicted RBP26.07■■□□□ 1.76
NPAS3-203ENST00000357798 MYZAPP0CAP1 466 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 DNA2P51530 1060 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 SF3B3Q15393 1217 aaKnown RBP26.07■■□□□ 1.76
NPAS3-203ENST00000357798 RAD54LQ92698 747 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 CDK5RAP3Q96JB5 506 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 LSM14BQ9BX40 385 aaKnown RBP26.07■■□□□ 1.76
NPAS3-203ENST00000357798 KLC4Q9NSK0 619 aa26.07■■□□□ 1.76
NPAS3-203ENST00000357798 CRKLP46109 303 aaKnown RBP26.06■■□□□ 1.76
NPAS3-203ENST00000357798 BIRC3Q13489 604 aa26.06■■□□□ 1.76
NPAS3-203ENST00000357798 TBC1D5Q92609 795 aa26.06■■□□□ 1.76
NPAS3-203ENST00000357798 MTMR9Q96QG7 549 aa26.06■■□□□ 1.76
NPAS3-203ENST00000357798 USP17L3A6NCW0 530 aa26.06■■□□□ 1.76
NPAS3-203ENST00000357798 USP17L4A6NCW7 530 aa26.06■■□□□ 1.76
NPAS3-203ENST00000357798 PRDX5P30044 214 aa26.06■■□□□ 1.76
NPAS3-203ENST00000357798 HSD17B3P37058 310 aa26.06■■□□□ 1.76
NPAS3-203ENST00000357798 TRADDQ15628 312 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms