RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 COL19A1Q14993 1142 aa12.34□□□□□ -0.43
PSEN1-202ENST00000357710 ADRM1Q16186 407 aa12.34□□□□□ -0.43
PSEN1-202ENST00000357710 RUFY4Q6ZNE9 571 aa12.34□□□□□ -0.43
PSEN1-202ENST00000357710 C11orf74Q86VG3 221 aa12.34□□□□□ -0.43
PSEN1-202ENST00000357710 NOA1Q8NC60 698 aaKnown RBP12.34□□□□□ -0.43
PSEN1-202ENST00000357710 HIC2Q96JB3 615 aa12.34□□□□□ -0.43
PSEN1-202ENST00000357710 PGBD1Q96JS3 809 aa12.34□□□□□ -0.43
PSEN1-202ENST00000357710 TTF2Q9UNY4 1162 aaKnown RBP12.34□□□□□ -0.43
PSEN1-202ENST00000357710 SLC30A1Q9Y6M5 507 aa12.34□□□□□ -0.43
PSEN1-202ENST00000357710 ARFGEF2Q9Y6D5 1785 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 ATP11AP98196 1134 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 SUZ12Q15022 739 aaKnown RBP12.33□□□□□ -0.44
PSEN1-202ENST00000357710 SAFBQ15424 915 aaKnown RBP eCLIP12.33□□□□□ -0.44
PSEN1-202ENST00000357710 WDR75Q8IWA0 830 aaKnown RBP12.33□□□□□ -0.44
PSEN1-202ENST00000357710 CAVIN3Q969G5 261 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 SEZ6LQ9BYH1 1024 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 INIPQ9NRY2 104 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 LARSQ9P2J5 1176 aaKnown RBP12.33□□□□□ -0.44
PSEN1-202ENST00000357710 TIMM22Q9Y584 194 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 CCT8L1PA6NM43 557 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 BTBD19C9JJ37 291 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 IFIT3O14879 490 aaKnown RBP12.33□□□□□ -0.44
PSEN1-202ENST00000357710 PAEPP09466 180 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 TNFRSF8P28908 595 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 CFAP58Q5T655 872 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 TOGARAM2Q6ZUX3 1019 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 SCAIQ8N9R8 606 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 MLKLQ8NB16 471 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 XAGE3Q8WTP9 111 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 GBP5Q96PP8 586 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 TUBGCP5Q96RT8 1024 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 MEIS3Q99687 375 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 HNRNPABQ99729 332 aaKnown RBP12.33□□□□□ -0.44
PSEN1-202ENST00000357710 FTOQ9C0B1 505 aaKnown RBP eCLIP12.33□□□□□ -0.44
PSEN1-202ENST00000357710 C1orf115Q9H7X2 142 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 QTRT2Q9H974 415 aaKnown RBP12.33□□□□□ -0.44
PSEN1-202ENST00000357710 CCDC87Q9NVE4 849 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 MKS1Q9NXB0 559 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 SCHIP1Q9P0W5 487 aaPredicted RBP12.33□□□□□ -0.44
PSEN1-202ENST00000357710 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.44
PSEN1-202ENST00000357710 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-202ENST00000357710 STARD3NLO95772 234 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 VARSP26640 1264 aaKnown RBP12.32□□□□□ -0.44
PSEN1-202ENST00000357710 EPHB4P54760 987 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 AK2P54819 239 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 AMPD2Q01433 879 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 AIMP1Q12904 312 aaKnown RBP12.32□□□□□ -0.44
PSEN1-202ENST00000357710 ITIH4Q14624 930 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 SPDYCQ5MJ68 293 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 ATL3Q6DD88 541 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 BPHLQ86WA6 291 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-202ENST00000357710 VPS37AQ8NEZ2 397 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 LEMD3Q9Y2U8 911 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-202ENST00000357710 IQCA1LA6NCM1 817 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 NQO1P15559 274 aaKnown RBP12.32□□□□□ -0.44
PSEN1-202ENST00000357710 ZNF132P52740 706 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 UBASH3AP57075 661 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 CTAG1AP78358 180 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 FAM160A1Q05DH4 1040 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 MAP3K12Q12852 859 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 RUFY3Q7L099 469 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 LRP10Q7Z4F1 713 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 PNMA8AQ86V59 439 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-202ENST00000357710 ANKS4BQ8N8V4 417 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 GABPB2Q8TAK5 448 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-202ENST00000357710 ATP8B4Q8TF62 1192 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 CDK5RAP3Q96JB5 506 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 CCT7Q99832 543 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 CLK4Q9HAZ1 481 aaKnown RBP12.32□□□□□ -0.44
PSEN1-202ENST00000357710 GINM1Q9NU53 330 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 FADS3Q9Y5Q0 445 aa12.32□□□□□ -0.44
PSEN1-202ENST00000357710 ZNF831Q5JPB2 1677 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 NUP188Q5SRE5 1749 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 MAP3K13O43283 966 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 TRAPPC3O43617 180 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 TUBP50607 506 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 TMEM259Q4ZIN3 620 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 PDCD4Q53EL6 469 aaKnown RBP12.31□□□□□ -0.44
PSEN1-202ENST00000357710 ZNF569Q5MCW4 686 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 BEND3Q5T5X7 828 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 ZNF772Q68DY9 489 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-202ENST00000357710 SLC2A7Q6PXP3 512 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 COPS6Q7L5N1 327 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 RIC3Q7Z5B4 369 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 DNAJC10Q8IXB1 793 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 RPS6KC1Q96S38 1066 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 SLC7A5P2Q9GIP4 190 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 ANO2Q9NQ90 1003 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 PANK4Q9NVE7 773 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 PALLDQ8WX93 1383 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 HIP1RO75146 1068 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 ALDH1L1O75891 902 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 ZNF131P52739 623 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 KARSQ15046 597 aaKnown RBP12.31□□□□□ -0.44
PSEN1-202ENST00000357710 SPRED3Q2MJR0 410 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 KANK3Q6NY19 840 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 ITPKCQ96DU7 683 aa12.31□□□□□ -0.44
PSEN1-202ENST00000357710 NEK1Q96PY6 1258 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms