RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 ZSWIM6Q9HCJ5 1215 aa17.41■□□□□ 0.38
RXRA-201ENST00000356384 ZNF500O60304 480 aaPredicted RBP17.4■□□□□ 0.38
RXRA-201ENST00000356384 CACNB1Q02641 598 aaPredicted RBP17.4■□□□□ 0.38
RXRA-201ENST00000356384 LRRC41Q15345 812 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 DCAF15Q66K64 600 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 CDC26Q8NHZ8 85 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 MT-ND3P03897 115 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 PSMC2P35998 433 aaKnown RBP17.4■□□□□ 0.38
RXRA-201ENST00000356384 SPOPLQ6IQ16 392 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 ARHGEF18Q6ZSZ5 1173 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 MED23Q9ULK4 1368 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 DARS2Q6PI48 645 aaKnown RBP17.4■□□□□ 0.38
RXRA-201ENST00000356384 TRIM11Q96F44 468 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 NBPF3Q9H094 633 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 CFLARO15519 480 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 EIF4A1P60842 406 aaKnown RBP17.4■□□□□ 0.38
RXRA-201ENST00000356384 ZBTB41Q5SVQ8 909 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 TRMT10CQ7L0Y3 403 aaKnown RBP17.4■□□□□ 0.38
RXRA-201ENST00000356384 ABI1Q8IZP0 508 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 LARP4BQ92615 738 aaKnown RBP17.4■□□□□ 0.38
RXRA-201ENST00000356384 NEO1Q92859 1461 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 CTNND1O60716 968 aaKnown RBP17.4■□□□□ 0.38
RXRA-201ENST00000356384 AFPP02771 609 aaKnown RBP17.4■□□□□ 0.38
RXRA-201ENST00000356384 SNX25Q9H3E2 840 aa17.4■□□□□ 0.38
RXRA-201ENST00000356384 XPOTO43592 962 aaKnown RBP17.39■□□□□ 0.37
RXRA-201ENST00000356384 CXCR5P32302 372 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 KRT80Q6KB66 452 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 SMYD4Q8IYR2 804 aaPredicted RBP17.39■□□□□ 0.37
RXRA-201ENST00000356384 GDAP1Q8TB36 358 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 IRAK4Q9NWZ3 460 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 SUCLA2Q9P2R7 463 aaPredicted RBP17.39■□□□□ 0.37
RXRA-201ENST00000356384 NRBP1Q9UHY1 535 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 ADCY9O60503 1353 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 TRIP13Q15645 432 aaPredicted RBP17.39■□□□□ 0.37
RXRA-201ENST00000356384 GPT2Q8TD30 523 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 PCIF1Q9H4Z3 704 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 PCDHA5Q9Y5H7 936 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 WDR91A4D1P6 747 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 NCF2P19878 526 aaPredicted RBP17.39■□□□□ 0.37
RXRA-201ENST00000356384 PDIA3P30101 505 aaKnown RBP17.39■□□□□ 0.37
RXRA-201ENST00000356384 ZNF449Q6P9G9 518 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 FAM8A1Q9UBU6 413 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 RRP15Q9Y3B9 282 aaKnown RBP17.39■□□□□ 0.37
RXRA-201ENST00000356384 CFAP74Q9C0B2 1584 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 INO80B-WBP1J3KQ70 363 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 GSPT1P15170 499 aaKnown RBP17.39■□□□□ 0.37
RXRA-201ENST00000356384 PKP1Q13835 747 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 PCGF5Q86SE9 256 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 FAM186BQ8IYM0 893 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 EAF2Q96CJ1 260 aaPredicted RBP17.39■□□□□ 0.37
RXRA-201ENST00000356384 CFAP36Q96G28 342 aa17.39■□□□□ 0.37
RXRA-201ENST00000356384 INO80BQ9C086 356 aaPredicted RBP17.39■□□□□ 0.37
RXRA-201ENST00000356384 PGRMC1O00264 195 aaKnown RBP17.38■□□□□ 0.37
RXRA-201ENST00000356384 FTCDO95954 541 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 DHX9Q08211 1270 aaKnown RBP17.38■□□□□ 0.37
RXRA-201ENST00000356384 SCRN1Q12765 414 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 ART3Q13508 389 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 ZNF577Q9BSK1 485 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 CPSF3Q9UKF6 684 aaKnown RBP17.38■□□□□ 0.37
RXRA-201ENST00000356384 INTUQ9ULD6 942 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 CLIC2O15247 247 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 ARL4AP40617 200 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 ABCB5Q2M3G0 1257 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 Q3C1V9 767 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 SPICE1Q8N0Z3 855 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 SPATS2LQ9NUQ6 558 aaKnown RBP17.38■□□□□ 0.37
RXRA-201ENST00000356384 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 CALN1Q9BXU9 219 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 JRKLQ9Y4A0 524 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 ZFYVE16Q7Z3T8 1539 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 C7orf31Q8N865 590 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 MAGEF1Q9HAY2 307 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 STK17AQ9UEE5 414 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 FOSP01100 380 aaPredicted RBP17.38■□□□□ 0.37
RXRA-201ENST00000356384 ATP2B4P23634 1241 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 KCTD6Q8NC69 237 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 BANK1Q8NDB2 785 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 NUDCD1Q96RS6 583 aa17.38■□□□□ 0.37
RXRA-201ENST00000356384 SCHIP1Q9P0W5 487 aaPredicted RBP17.38■□□□□ 0.37
RXRA-201ENST00000356384 EEF1DP29692 281 aaKnown RBP17.37■□□□□ 0.37
RXRA-201ENST00000356384 METTL23Q86XA0 190 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 FBXL13Q8NEE6 735 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 KMT5AQ9NQR1 393 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 HNRNPCL2B2RXH8 293 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 MAP3K7O43318 606 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 HNRNPCL1O60812 293 aaKnown RBP17.37■□□□□ 0.37
RXRA-201ENST00000356384 MOCS3O95396 460 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 NOP14P78316 857 aaKnown RBP17.37■□□□□ 0.37
RXRA-201ENST00000356384 FAM133AQ8N9E0 248 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 TAF11Q15544 211 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 PI4K2BQ8TCG2 481 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 P2RX5Q93086 422 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 GSDMAQ96QA5 445 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 KPNA2P52292 529 aaKnown RBP17.37■□□□□ 0.37
RXRA-201ENST00000356384 ARPP19P56211 112 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 LRRC24Q50LG9 513 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 ACCSQ96QU6 501 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 TTC1Q99614 292 aa17.37■□□□□ 0.37
RXRA-201ENST00000356384 PACSIN2Q9UNF0 486 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms