RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 FAM186BQ8IYM0 893 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 GDAP1Q8TB36 358 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 MID2Q9UJV3 735 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 MAGED2Q9UNF1 606 aaPredicted RBP16.1■□□□□ 0.17
LMX1B-201ENST00000355497 ABCC12Q96J65 1359 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 ZNF233A6NK53 670 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 ZMYND10O75800 440 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 PCP11498 1178 aaKnown RBP16.1■□□□□ 0.17
LMX1B-201ENST00000355497 NCF2P19878 526 aaPredicted RBP16.1■□□□□ 0.17
LMX1B-201ENST00000355497 ATICP31939 592 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 DYNLT1P63172 113 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 NNTQ13423 1086 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 TDRD7Q8NHU6 1098 aaKnown RBP16.1■□□□□ 0.17
LMX1B-201ENST00000355497 PCDHA4Q9UN74 947 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 EIF4G3O43432 1585 aaKnown RBP16.1■□□□□ 0.17
LMX1B-201ENST00000355497 SLC4A1P02730 911 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 HSPA6P17066 643 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 PDIA3P30101 505 aaKnown RBP16.1■□□□□ 0.17
LMX1B-201ENST00000355497 A0A087WUV0 522 aaPredicted RBP16.1■□□□□ 0.17
LMX1B-201ENST00000355497 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
LMX1B-201ENST00000355497 GIPC2Q8TF65 315 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 POLR3CQ9BUI4 534 aaPredicted RBP16.1■□□□□ 0.17
LMX1B-201ENST00000355497 MRPL47Q9HD33 250 aaKnown RBP16.1■□□□□ 0.17
LMX1B-201ENST00000355497 OLA1Q9NTK5 396 aaKnown RBP16.1■□□□□ 0.17
LMX1B-201ENST00000355497 RNF14Q9UBS8 474 aa16.1■□□□□ 0.17
LMX1B-201ENST00000355497 MOCS3O95396 460 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 POLE2P56282 527 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 MAN2A1Q16706 1144 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 AK8Q96MA6 479 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 PLS3P13797 630 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 GYG1P46976 350 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 SCRN1Q12765 414 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 TRMT10CQ7L0Y3 403 aaKnown RBP16.09■□□□□ 0.17
LMX1B-201ENST00000355497 ATP6V0A1Q93050 837 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 PCDHA1Q9Y5I3 950 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 TEX14Q8IWB6 1497 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 ARHGEF10O15013 1369 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 GOLGA8SH3BPF8 625 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 GOLGA8FQ08AF8 430 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 GOLGA8DPQ0D2H9 430 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 DNAJC24Q6P3W2 148 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 TESK2Q96S53 571 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 ZNF577Q9BSK1 485 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 FOXP1Q9H334 677 aaPredicted RBP16.09■□□□□ 0.17
LMX1B-201ENST00000355497 GSPT1P15170 499 aaKnown RBP16.09■□□□□ 0.17
LMX1B-201ENST00000355497 TRAPPC10P48553 1259 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 ARHGDIAP52565 204 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 C10orf76Q5T2E6 689 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 PCGF5Q86SE9 256 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 CACTINQ8WUQ7 758 aaKnown RBP16.09■□□□□ 0.17
LMX1B-201ENST00000355497 FAM149B1Q96BN6 582 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 CENPKQ9BS16 269 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 TRAIPQ9BWF2 469 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 KMT5AQ9NQR1 393 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 TBK1Q9UHD2 729 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 CPSF3Q9UKF6 684 aaKnown RBP16.09■□□□□ 0.17
LMX1B-201ENST00000355497 NCKAP5LQ9HCH0 1330 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 CFLARO15519 480 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 ZNF658Q5TYW1 1059 aaPredicted RBP16.09■□□□□ 0.17
LMX1B-201ENST00000355497 AKT3Q9Y243 479 aa16.09■□□□□ 0.17
LMX1B-201ENST00000355497 IKBKBO14920 756 aa16.08■□□□□ 0.17
LMX1B-201ENST00000355497 RNF217Q8TC41 542 aa16.08■□□□□ 0.17
LMX1B-201ENST00000355497 KIAA0232Q92628 1395 aa16.08■□□□□ 0.17
LMX1B-201ENST00000355497 SYCP2Q9BX26 1530 aa16.08■□□□□ 0.17
LMX1B-201ENST00000355497 FMNL1O95466 1100 aaPredicted RBP16.08■□□□□ 0.16
LMX1B-201ENST00000355497 SLCO1A2P46721 670 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 BCAMP50895 628 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 MIS18BP1Q6P0N0 1132 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 JPH2Q9BR39 696 aaPredicted RBP16.08■□□□□ 0.16
LMX1B-201ENST00000355497 SLC13A4Q9UKG4 626 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 EXOC1LA0A1B0GW35 172 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 CHEK2O96017 543 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 ZBTB41Q5SVQ8 909 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 TRIM67Q6ZTA4 783 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 ST13P4Q8IZP2 240 aaPredicted RBP16.08■□□□□ 0.16
LMX1B-201ENST00000355497 PI4K2BQ8TCG2 481 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 ATP8B3O60423 1300 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 FGAP02671 866 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 ESRRAP11474 423 aaPredicted RBP16.08■□□□□ 0.16
LMX1B-201ENST00000355497 SCNN1DP51172 638 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 ALS2CLQ60I27 953 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 FAM133AQ8N9E0 248 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 TRAPPC8Q9Y2L5 1435 aa16.08■□□□□ 0.16
LMX1B-201ENST00000355497 FTCDO95954 541 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 ABCB5Q2M3G0 1257 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 NBPF3Q9H094 633 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 UPF3AQ9H1J1 476 aaKnown RBP16.07■□□□□ 0.16
LMX1B-201ENST00000355497 FGFR1OP2Q9NVK5 253 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 TEKT2Q9UIF3 430 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 MAPKBP1O60336 1514 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 IQANK1A0A1B0GTG1 560 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 RASGRF2O14827 1237 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 DMTNQ08495 405 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 SLC39A14Q15043 492 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 MAML1Q92585 1016 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 KIFC3Q9BVG8 833 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 TMEM206Q9H813 350 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 ABCD1P33897 745 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 AMNQ9BXJ7 453 aa16.07■□□□□ 0.16
LMX1B-201ENST00000355497 PALD1Q9ULE6 856 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms