RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 ENO4A6NNW6 628 aa11.27□□□□□ -0.61
SYNE1-203ENST00000354674 VCAM1P19320 739 aa11.27□□□□□ -0.61
SYNE1-203ENST00000354674 NF2P35240 595 aa11.27□□□□□ -0.61
SYNE1-203ENST00000354674 SETQ01105 290 aaPredicted RBP11.27□□□□□ -0.61
SYNE1-203ENST00000354674 SF3A1Q15459 793 aaKnown RBP11.27□□□□□ -0.61
SYNE1-203ENST00000354674 KCNG4Q8TDN1 519 aa11.27□□□□□ -0.61
SYNE1-203ENST00000354674 LOC285556D6RIA3 1793 aa11.27□□□□□ -0.61
SYNE1-203ENST00000354674 PTPRFP10586 1907 aa11.27□□□□□ -0.61
SYNE1-203ENST00000354674 PPP6R2O75170 966 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 ELF1P32519 619 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 PSMD2Q13200 908 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 NAA25Q14CX7 972 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 LDLRAD1Q5T700 205 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.26□□□□□ -0.61
SYNE1-203ENST00000354674 ANKRD13AQ8IZ07 590 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 PDILTQ8N807 584 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 DESI2Q9BSY9 194 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 AMNQ9BXJ7 453 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 ABCB6Q9NP58 842 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 LDHDQ86WU2 507 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 DHX58Q96C10 678 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 GLT8D2Q9H1C3 349 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 PCDHA1Q9Y5I3 950 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 FAM169AQ9Y6X4 670 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 EFCAB8A8MWE9 144 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 SPTLC2O15270 562 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 ADCY7P51828 1080 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 PPATQ06203 517 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 DGKZQ13574 1117 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 PRKG1Q13976 671 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 FBXO11Q86XK2 927 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 HOMEZQ8IX15 550 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
SYNE1-203ENST00000354674 PCDHB6Q9Y5E3 794 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 CSADQ9Y600 493 aa11.26□□□□□ -0.61
SYNE1-203ENST00000354674 IQCB1Q15051 598 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 NBPF20Q3BBV1 942 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 JAKMIP3Q5VZ66 844 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 PIK3AP1Q6ZUJ8 805 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 KRT25Q7Z3Z0 450 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 ZBTB10Q96DT7 871 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 SLF1Q9BQI6 1058 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 KIF9Q9HAQ2 790 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 FBXO28Q9NVF7 368 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 PCDHA7Q9UN72 937 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 A0A1W2PQ27 194 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 A0A1W2PQ64 194 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 A0A1W2PQD8 194 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 WNT7AO00755 349 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 ZMYND10O75800 440 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 GCKP35557 465 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 TRAF1Q13077 416 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 IKQ13123 557 aaPredicted RBP11.25□□□□□ -0.61
SYNE1-203ENST00000354674 ADALQ6DHV7 355 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 RASGRP4Q8TDF6 673 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 CUL5Q93034 780 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 PNKPQ96T60 521 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 RPAP3Q9H6T3 665 aaPredicted RBP11.25□□□□□ -0.61
SYNE1-203ENST00000354674 ODF2LQ9ULJ1 636 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 ADAMTS5Q9UNA0 930 aa11.25□□□□□ -0.61
SYNE1-203ENST00000354674 ZNF536O15090 1300 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 TRIM75PA6NK02 468 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 OPLAHO14841 1288 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 UPP2O95045 317 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 CLNS1AP54105 237 aaKnown RBP11.24□□□□□ -0.61
SYNE1-203ENST00000354674 SNAP25P60880 206 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 STK38Q15208 465 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 MAP1SQ66K74 1059 aaPredicted RBP11.24□□□□□ -0.61
SYNE1-203ENST00000354674 ERO1BQ86YB8 467 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 REXO1Q8N1G1 1221 aaKnown RBP11.24□□□□□ -0.61
SYNE1-203ENST00000354674 KIFC2Q96AC6 838 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 PPP1R9AQ9ULJ8 1098 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 FDX1P10109 184 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 MRPL12P52815 198 aaKnown RBP11.24□□□□□ -0.61
SYNE1-203ENST00000354674 HMGCS2P54868 508 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 ARMC9Q7Z3E5 817 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 PSTPIP2Q9H939 334 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 SLC38A10Q9HBR0 1119 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 CPSF2Q9P2I0 782 aaKnown RBP11.24□□□□□ -0.61
SYNE1-203ENST00000354674 CEP131Q9UPN4 1083 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 KCNH4Q9UQ05 1017 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 CCDC194A0A1B0GVG4 234 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 DCAF8L1A6NGE4 600 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 PIK3CDO00329 1044 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 MEIS2O14770 477 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 BMP15O95972 392 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 SF3A3Q12874 501 aaKnown RBP eCLIP11.24□□□□□ -0.61
SYNE1-203ENST00000354674 TTC38Q5R3I4 469 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 CATSPERGQ6ZRH7 1159 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 MOB2Q70IA6 237 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 PARD3BQ8TEW8 1205 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 CLMNQ96JQ2 1002 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 CLSTN2Q9H4D0 955 aa11.24□□□□□ -0.61
SYNE1-203ENST00000354674 A0A0G2JLL6 359 aaPredicted RBP11.23□□□□□ -0.61
SYNE1-203ENST00000354674 EDIL3O43854 480 aa11.23□□□□□ -0.61
SYNE1-203ENST00000354674 ICAM1P05362 532 aa11.23□□□□□ -0.61
SYNE1-203ENST00000354674 NAP1L1P55209 391 aaKnown RBP11.23□□□□□ -0.61
SYNE1-203ENST00000354674 FKBP1BP68106 108 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms