RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 DHX37Q8IY37 1157 aaKnown RBP13.24□□□□□ -0.29
CDRT1-202ENST00000354433 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
CDRT1-202ENST00000354433 IL31RAQ8NI17 732 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 SMARCC2Q8TAQ2 1214 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 CUL5Q93034 780 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 ZFP91Q96JP5 570 aaPredicted RBP13.24□□□□□ -0.29
CDRT1-202ENST00000354433 MAP3K14Q99558 947 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 LZTS2Q9BRK4 669 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 SPZ1Q9BXG8 430 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 IL23AQ9NPF7 189 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 DDX41Q9UJV9 622 aaKnown RBP13.24□□□□□ -0.29
CDRT1-202ENST00000354433 DNAJB2P25686 324 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 LIFRP42702 1097 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 COL9A3Q14050 684 aaPredicted RBP13.24□□□□□ -0.29
CDRT1-202ENST00000354433 DGKDQ16760 1214 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 GNPTABQ3T906 1256 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 DHX32Q7L7V1 743 aaKnown RBP13.24□□□□□ -0.29
CDRT1-202ENST00000354433 OTOP2Q7RTS6 562 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 FBXL16Q8N461 479 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 CCDC82Q8N4S0 544 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 SLC17A8Q8NDX2 589 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 TNPO1Q92973 898 aaKnown RBP13.24□□□□□ -0.29
CDRT1-202ENST00000354433 GUCD1Q96NT3 240 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 GBP4Q96PP9 640 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 WNT8AQ9H1J5 351 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 LAMA2P24043 3122 aaKnown RBP13.23□□□□□ -0.29
CDRT1-202ENST00000354433 ZBBXA8MT70 800 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 GGPS1O95749 300 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 ZNF286BP0CG31 522 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 PDIA4P13667 645 aaKnown RBP13.23□□□□□ -0.29
CDRT1-202ENST00000354433 CPA1P15085 419 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 PTMSP20962 102 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 FGD1P98174 961 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 LAMC2Q13753 1193 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 KCNV1Q6PIU1 500 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 C16orf59Q7L2K0 433 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 DEFB128Q7Z7B8 93 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 RPUSD2Q8IZ73 545 aaKnown RBP13.23□□□□□ -0.29
CDRT1-202ENST00000354433 TCEANC2Q96MN5 208 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 KATNAL1Q9BW62 490 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 AGXT2Q9BYV1 514 aa13.23□□□□□ -0.29
CDRT1-202ENST00000354433 NAP1L2Q9ULW6 460 aaPredicted RBP13.23□□□□□ -0.29
CDRT1-202ENST00000354433 hCG_1642624A0A1W2PR95 340 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 DDX11L8A8MPP1 907 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 FGBP02675 491 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 UBA1P22314 1058 aaKnown RBP13.22□□□□□ -0.29
CDRT1-202ENST00000354433 MCM4P33991 863 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 EXOSC10Q01780 885 aaKnown RBP13.22□□□□□ -0.29
CDRT1-202ENST00000354433 PTPN11Q06124 597 aaPredicted RBP13.22□□□□□ -0.29
CDRT1-202ENST00000354433 PTGISQ16647 500 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 USP17L6PQ6QN14 398 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 VSIG10LQ86VR7 867 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 SRBD1Q8N5C6 995 aaKnown RBP13.22□□□□□ -0.29
CDRT1-202ENST00000354433 C7orf31Q8N865 590 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 RETREG2Q8NC44 543 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 PPTC7Q8NI37 304 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 EMID1Q96A84 441 aaPredicted RBP13.22□□□□□ -0.29
CDRT1-202ENST00000354433 TIFAQ96CG3 184 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 SPATA33Q96N06 139 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 ALG1Q9BT22 464 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 TTYH1Q9H313 450 aaPredicted RBP13.22□□□□□ -0.29
CDRT1-202ENST00000354433 SEMA6BQ9H3T3 888 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 MLXIPQ9HAP2 919 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 TCHHQ07283 1943 aa13.22□□□□□ -0.29
CDRT1-202ENST00000354433 TMEM265A0A087WTH1 108 aa13.21□□□□□ -0.29
CDRT1-202ENST00000354433 GRXCR1A8MXD5 290 aa13.21□□□□□ -0.29
CDRT1-202ENST00000354433 RGS20O76081 388 aa13.21□□□□□ -0.29
CDRT1-202ENST00000354433 COL6A3P12111 3177 aa13.21□□□□□ -0.29
CDRT1-202ENST00000354433 SMARCA1P28370 1054 aa13.21□□□□□ -0.29
CDRT1-202ENST00000354433 BFSP2Q13515 415 aa13.21□□□□□ -0.29
CDRT1-202ENST00000354433 TOB2Q14106 344 aaPredicted RBP13.21□□□□□ -0.29
CDRT1-202ENST00000354433 HEATR3Q7Z4Q2 680 aa13.21□□□□□ -0.29
CDRT1-202ENST00000354433 CCDC155Q8N6L0 562 aa13.21□□□□□ -0.29
CDRT1-202ENST00000354433 CDX2Q99626 313 aaPredicted RBP13.21□□□□□ -0.29
CDRT1-202ENST00000354433 NOP56O00567 594 aaKnown RBP13.2□□□□□ -0.3
CDRT1-202ENST00000354433 FOSL2P15408 326 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 PSEN2P49810 448 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 MFSD10Q14728 455 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 ME3Q16798 604 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 KIAA0753Q2KHM9 967 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 HSDL1Q3SXM5 330 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 CELF3Q5SZQ8 465 aaKnown RBP13.2□□□□□ -0.3
CDRT1-202ENST00000354433 TMTC3Q6ZXV5 915 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 SGMS1Q86VZ5 419 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 MYLIPQ8WY64 445 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 HERVK_113Q902F9 699 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 GPKOWQ92917 476 aaPredicted RBP eCLIP13.2□□□□□ -0.3
CDRT1-202ENST00000354433 PBX4Q9BYU1 374 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 RTEL1Q9NZ71 1219 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 CXXC1Q9P0U4 656 aaPredicted RBP13.2□□□□□ -0.3
CDRT1-202ENST00000354433 TPCN1Q9ULQ1 816 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 BAZ2BQ9UIF8 2168 aaKnown RBP13.2□□□□□ -0.3
CDRT1-202ENST00000354433 SCN10AQ9Y5Y9 1956 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 ZBTB43O43298 467 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 STAM2O75886 525 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 F2P00734 622 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 PFKMP08237 780 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 TGFB3P10600 412 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms