RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 CCDC84Q86UT8 332 aaPredicted RBP22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 TMTC1Q8IUR5 882 aa22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 ANKRD7Q92527 254 aa22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 DESI2Q9BSY9 194 aa22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 PDCL3Q9H2J4 239 aa22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 RANBP17Q9H2T7 1088 aaKnown RBP22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 ADGRG1Q9Y653 693 aa22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 RNF225M0QZC1 329 aaPredicted RBP22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 RASA3Q14644 834 aa22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 FOXR2Q6PJQ5 311 aa22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 KIFC2Q96AC6 838 aa22.69■■□□□ 1.22
CHRNA3-202ENST00000348639 POTEB3A0JP26 581 aa22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 POTECB2RU33 542 aa22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 E9PMD0 336 aa22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 PES1O00541 588 aaKnown RBP22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 PLA2G4BP0C869 781 aa22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 KRT9P35527 623 aa22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 STAT3P40763 770 aa22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 LRRC63Q05C16 580 aa22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 NCBP1Q09161 790 aaKnown RBP22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 POTEBQ6S5H4 581 aa22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 FAM160B2Q86V87 743 aa22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 GLIS2Q9BZE0 524 aaPredicted RBP22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 STK24Q9Y6E0 443 aa22.68■■□□□ 1.22
CHRNA3-202ENST00000348639 B4DLN1 442 aa22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 MED24O75448 989 aa22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 SLU7O95391 586 aaKnown RBP22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 COASYQ13057 564 aa22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 CCDC174Q6PII3 467 aa22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 ERMNQ8TAM6 284 aa22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 EEF2KMTQ96G04 330 aa22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 ZNF215Q9UL58 517 aaPredicted RBP22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 FGFR1OPO95684 399 aaKnown RBP22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 ASNSP08243 561 aa22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 MTIF2P46199 727 aaKnown RBP22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 CYP26C1Q6V0L0 522 aa22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 ERO1AQ96HE7 468 aa22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 PANK4Q9NVE7 773 aa22.67■■□□□ 1.22
CHRNA3-202ENST00000348639 BRCA1P38398 1863 aaKnown RBP22.66■■□□□ 1.22
CHRNA3-202ENST00000348639 TTC26A0AVF1 554 aa22.66■■□□□ 1.22
CHRNA3-202ENST00000348639 SSBP05455 408 aaKnown RBP eCLIP22.66■■□□□ 1.22
CHRNA3-202ENST00000348639 RASSF7Q02833 373 aa22.66■■□□□ 1.22
CHRNA3-202ENST00000348639 FEM1BQ9UK73 627 aa22.66■■□□□ 1.22
CHRNA3-202ENST00000348639 CAPN11Q9UMQ6 739 aa22.66■■□□□ 1.22
CHRNA3-202ENST00000348639 GJA3Q9Y6H8 435 aa22.66■■□□□ 1.22
CHRNA3-202ENST00000348639 FANCGO15287 622 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 MSH4O15457 936 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 RPA1P27694 616 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 ERVK-24P63145 666 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 TBC1D8BQ0IIM8 1120 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 MIIPQ5JXC2 388 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 CATSPER3Q86XQ3 398 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 CCDC65Q8IXS2 484 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 NOC4LQ9BVI4 516 aaKnown RBP22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 MRPL44Q9H9J2 332 aaKnown RBP22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 LUC7L2Q9Y383 392 aaKnown RBP22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 FAM26FQ5R3K3 315 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 NCAPH2Q6IBW4 605 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 SAMD7Q7Z3H4 446 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 GPBP1Q86WP2 473 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 MICALL2Q8IY33 904 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 MYOCDQ8IZQ8 938 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 RETREG2Q8NC44 543 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 OR8K1Q8NGG5 319 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 DNAJC7Q99615 494 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 NUP58Q9BVL2 599 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 MRPL11Q9Y3B7 192 aaKnown RBP22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 ABCB11O95342 1321 aa22.65■■□□□ 1.22
CHRNA3-202ENST00000348639 GCOM1H8Y6P7 765 aaPredicted RBP22.64■■□□□ 1.22
CHRNA3-202ENST00000348639 CFBP00751 764 aa22.64■■□□□ 1.22
CHRNA3-202ENST00000348639 POLR2MP0CAP2 368 aa22.64■■□□□ 1.22
CHRNA3-202ENST00000348639 CYP11B2P19099 503 aa22.64■■□□□ 1.22
CHRNA3-202ENST00000348639 ZNF76P36508 570 aa22.64■■□□□ 1.22
CHRNA3-202ENST00000348639 SLC12A3P55017 1021 aa22.64■■□□□ 1.22
CHRNA3-202ENST00000348639 ZNF280AP59817 542 aaPredicted RBP22.64■■□□□ 1.22
CHRNA3-202ENST00000348639 TNFAIP1Q13829 316 aa22.64■■□□□ 1.22
CHRNA3-202ENST00000348639 FEZ1Q99689 392 aa22.64■■□□□ 1.22
CHRNA3-202ENST00000348639 SMCHD1A6NHR9 2005 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 PITPNM2Q9BZ72 1349 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 IGLV3-22A0A075B6J6 115 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 POTEFA5A3E0 1075 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 POTEIP0CG38 1075 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 SPATA31C1P0DKV0 1188 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 RPS12P25398 132 aaKnown RBP22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 GMPSP49915 693 aaPredicted RBP22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 GNG11P61952 73 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 POTEGQ6S5H5 508 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 POTEEQ6S8J3 1075 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 GLIS3Q8NEA6 775 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 ERGIC2Q96RQ1 377 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 TSG101Q99816 390 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 ZNF341Q9BYN7 854 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 VAV3Q9UKW4 847 aa22.64■■□□□ 1.21
CHRNA3-202ENST00000348639 PHF20L1A8MW92 1017 aa22.63■■□□□ 1.21
CHRNA3-202ENST00000348639 LRRC41Q15345 812 aa22.63■■□□□ 1.21
CHRNA3-202ENST00000348639 TBC1D10BQ4KMP7 808 aaPredicted RBP22.63■■□□□ 1.21
CHRNA3-202ENST00000348639 CYP2W1Q8TAV3 490 aa22.63■■□□□ 1.21
CHRNA3-202ENST00000348639 TBC1D5Q92609 795 aa22.63■■□□□ 1.21
CHRNA3-202ENST00000348639 TTYH3Q9C0H2 523 aa22.63■■□□□ 1.21
CHRNA3-202ENST00000348639 FBXO28Q9NVF7 368 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms