RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 GDF11O95390 407 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 KRT71Q3SY84 523 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 SWT1Q5T5J6 900 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 GET4Q7L5D6 327 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 SPATA21Q7Z572 469 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 FLAD1Q8NFF5 587 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 HAUS2Q9NVX0 235 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 TRPC5Q9UL62 973 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 CCPG1Q9ULG6 757 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 ABL1P00519 1130 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 SERPINB2P05120 415 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 SCG2P13521 617 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 TBL3Q12788 808 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 ITGB3BPQ13352 177 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 PI16Q6UXB8 463 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 U2AF1L4Q8WU68 220 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 EEF2KMTQ96G04 330 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 ZNF274Q96GC6 653 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 MED10Q9BTT4 135 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 NT5C3AQ9H0P0 336 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 DBNLQ9UJU6 430 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 YARSP54577 528 aaKnown RBP12.02□□□□□ -0.48
SMARCE1-202ENST00000348513 KLC1Q07866 573 aa12.02□□□□□ -0.48
SMARCE1-202ENST00000348513 BSPRYQ5W0U4 402 aa12.02□□□□□ -0.48
SMARCE1-202ENST00000348513 CASC4Q6P4E1 433 aa12.02□□□□□ -0.48
SMARCE1-202ENST00000348513 PGBD1Q96JS3 809 aa12.02□□□□□ -0.48
SMARCE1-202ENST00000348513 PANK4Q9NVE7 773 aa12.02□□□□□ -0.48
SMARCE1-202ENST00000348513 RTEL1Q9NZ71 1219 aa12.02□□□□□ -0.48
SMARCE1-202ENST00000348513 TULP2O00295 520 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 PDE5AO76074 875 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 ESRRBO95718 433 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 CFAP61Q8NHU2 1237 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.02□□□□□ -0.494e-8■■■■■ 36.3
SMARCE1-202ENST00000348513 CLMNQ96JQ2 1002 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 PLEKHF1Q96S99 279 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 PRDM16Q9HAZ2 1276 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 MRPL11Q9Y3B7 192 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 CLIC4Q9Y696 253 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 RNF123Q5XPI4 1314 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 LIG4P49917 911 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 KBTBD12Q3ZCT8 623 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 ALS2CLQ60I27 953 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 KCTD16Q68DU8 428 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 PLA2G4DQ86XP0 818 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 UNC5CLQ8IV45 518 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 CNKSR1Q969H4 720 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 MMS19Q96T76 1030 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 XPO4Q9C0E2 1151 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 ZCCHC17Q9NP64 241 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 AHCYL1O43865 530 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 KRT14P02533 472 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 EEF1DP29692 281 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 NNTQ13423 1086 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 PKP1Q13835 747 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 RASGRP4Q8TDF6 673 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 CSRNP1Q96S65 589 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 CARD9Q9H257 536 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 SLC39A2Q9NP94 309 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 SRP68Q9UHB9 627 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 XDHP47989 1333 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 PLEKHG2Q9H7P9 1386 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 MED23Q9ULK4 1368 aa12.02□□□□□ -0.49
SMARCE1-202ENST00000348513 SLC16A2P36021 539 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 DCAF15Q66K64 600 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 NEK8Q86SG6 692 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 CCDC13Q8IYE1 715 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 NLGN1Q8N2Q7 840 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 SH3GL1Q99961 368 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 TBC1D23Q9NUY8 699 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 CDC23Q9UJX2 597 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 BZW2Q9Y6E2 419 aaKnown RBP12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 ADGBQ8N7X0 1667 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 KDM3AQ9Y4C1 1321 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 APOEP02649 317 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 DLATP10515 647 aaKnown RBP12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 KCNA2P16389 499 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 MX2P20592 715 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 STAT2P52630 851 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 KCTD17Q8N5Z5 321 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 KCNJ18B7U540 433 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 PFKFB2O60825 505 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 STK10O94804 968 aaKnown RBP12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 OR52Z1P0C646 297 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 RAP1GDS1P52306 607 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 MKRN3Q13064 507 aaKnown RBP12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 SNX1Q13596 522 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 KCNJ12Q14500 433 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 CCT6BQ92526 530 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 OPTNQ96CV9 577 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.01□□□□□ -0.493e-7■■■□□ 15.4
SMARCE1-202ENST00000348513 TM6SF1Q9BZW5 370 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 ANKFY1Q9P2R3 1169 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 SAR1BQ9Y6B6 198 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 PRKAB2O43741 272 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 DIAPH2O60879 1101 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 RAD17O75943 681 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 MORC3Q14149 939 aa12.01□□□□□ -0.49
SMARCE1-202ENST00000348513 ADCK5Q3MIX3 580 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms