RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 DCAF5Q96JK2 942 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 CALR3Q96L12 384 aaKnown RBP16.85■□□□□ 0.29
LMNA-201ENST00000347559 INPP4AQ96PE3 977 aaPredicted RBP16.85■□□□□ 0.29
LMNA-201ENST00000347559 XPO6Q96QU8 1125 aaKnown RBP16.85■□□□□ 0.29
LMNA-201ENST00000347559 SH3GL3Q99963 347 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 DPH5Q9H2P9 285 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 EBF2Q9HAK2 575 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 BATF3Q9NR55 127 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 SIK3Q9Y2K2 1263 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 NID2Q14112 1375 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 CYP2D7A0A087X1C5 515 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 HNRNPH3P31942 346 aaKnown RBP16.85■□□□□ 0.29
LMNA-201ENST00000347559 SEC23AQ15436 765 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 KIAA0753Q2KHM9 967 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 RNF10Q8N5U6 811 aaKnown RBP16.85■□□□□ 0.29
LMNA-201ENST00000347559 SPATA5Q8NB90 893 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 PSMD1Q99460 953 aa16.85■□□□□ 0.29
LMNA-201ENST00000347559 PJA2O43164 708 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 GHRP10912 638 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 ECHS1P30084 290 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 DHX9Q08211 1270 aaKnown RBP16.84■□□□□ 0.29
LMNA-201ENST00000347559 ZNF570Q96NI8 536 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 PACSIN1Q9BY11 444 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 TMEM60Q9H2L4 133 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 SWAP70Q9UH65 585 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 MYH6P13533 1939 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 LCA5LO95447 670 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 VIMP08670 466 aaKnown RBP16.84■□□□□ 0.29
LMNA-201ENST00000347559 THEMIS2Q5TEJ8 643 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 FAM43BQ6ZT52 329 aaPredicted RBP16.84■□□□□ 0.29
LMNA-201ENST00000347559 MAEAQ7L5Y9 396 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 STAG2Q8N3U4 1231 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 LRRC15Q8TF66 581 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 P3H4Q92791 437 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 ZSCAN10Q96SZ4 725 aaPredicted RBP16.84■□□□□ 0.29
LMNA-201ENST00000347559 NOP53Q9NZM5 478 aaKnown RBP16.84■□□□□ 0.29
LMNA-201ENST00000347559 STK38LQ9Y2H1 464 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 ATRNO75882 1429 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 TMEM94Q12767 1356 aa16.84■□□□□ 0.29
LMNA-201ENST00000347559 HGSO14964 777 aaPredicted RBP16.83■□□□□ 0.29
LMNA-201ENST00000347559 MYBL1P10243 752 aa16.83■□□□□ 0.29
LMNA-201ENST00000347559 DNAAF5Q86Y56 855 aa16.83■□□□□ 0.29
LMNA-201ENST00000347559 ZSCAN29Q8IWY8 852 aaPredicted RBP16.83■□□□□ 0.29
LMNA-201ENST00000347559 TBC1D5Q92609 795 aa16.83■□□□□ 0.29
LMNA-201ENST00000347559 GPKOWQ92917 476 aaPredicted RBP eCLIP16.83■□□□□ 0.291e-9■■■■□ 23.2
LMNA-201ENST00000347559 UBR1Q8IWV7 1749 aa16.83■□□□□ 0.29
LMNA-201ENST00000347559 MYH7P12883 1935 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 KIF4AO95239 1232 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 MMEP08473 750 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 IFNAR2P48551 515 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 KCNJ2P63252 427 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 SRBD1Q8N5C6 995 aaKnown RBP16.83■□□□□ 0.28
LMNA-201ENST00000347559 AMACRQ9UHK6 382 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 ATP8A1Q9Y2Q0 1164 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 CD2APQ9Y5K6 639 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 GRID2IPA4D2P6 1211 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 SART1O43290 800 aaKnown RBP16.83■□□□□ 0.28
LMNA-201ENST00000347559 PLCG1P19174 1290 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 RPS6KA1Q15418 735 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 SPICE1Q8N0Z3 855 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 SEMA6BQ9H3T3 888 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 GOPCQ9HD26 462 aa16.83■□□□□ 0.28
LMNA-201ENST00000347559 SIPA1L3O60292 1781 aaPredicted RBP16.83■□□□□ 0.28
LMNA-201ENST00000347559 CHN1P15882 459 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 SNX1Q13596 522 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 CUL1Q13616 776 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 RASGRF1Q13972 1273 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 SLC9C1Q4G0N8 1177 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 MEI1Q5TIA1 1274 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 AGBL2Q5U5Z8 902 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 PDXDC1Q6P996 788 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 SAMD15Q9P1V8 674 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 RIC1Q4ADV7 1423 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 PDE8BO95263 885 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 UQCRFS1P1P0C7P4 283 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 SCG2P13521 617 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 ARL6IP4Q66PJ3 421 aaKnown RBP16.82■□□□□ 0.28
LMNA-201ENST00000347559 CCDC84Q86UT8 332 aaPredicted RBP16.82■□□□□ 0.28
LMNA-201ENST00000347559 LRRC34Q8IZ02 419 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 KIF2BQ8N4N8 673 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 BAP1Q92560 729 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 NLRP3Q96P20 1036 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 KBTBD4Q9NVX7 518 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 ADAMTS1Q9UHI8 967 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 AGAP1Q9UPQ3 857 aa16.82■□□□□ 0.28
LMNA-201ENST00000347559 DISP2A7MBM2 1401 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 TRAPPC10P48553 1259 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 CDCA2Q69YH5 1023 aaPredicted RBP16.81■□□□□ 0.28
LMNA-201ENST00000347559 KCNV2Q8TDN2 545 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 ABCF3Q9NUQ8 709 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 CPSF2Q9P2I0 782 aaKnown RBP16.81■□□□□ 0.28
LMNA-201ENST00000347559 LRP2BPQ9P2M1 347 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 MTMR7Q9Y216 660 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 SLIT3O75094 1523 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 LAMB4A4D0S4 1761 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 FAM205AQ6ZU69 1335 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 A8MUI8 341 aa16.81■□□□□ 0.28
LMNA-201ENST00000347559 IRF6O14896 467 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms