RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 COL15A1P39059 1388 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 PPARGP37231 505 aaPredicted RBP8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 MNAT1P51948 309 aa8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 ARHGAP4P98171 946 aa8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 PTH1RQ03431 593 aa8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 ELF2Q15723 593 aa8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 FAM186BQ8IYM0 893 aa8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 FBXO41Q8TF61 875 aa8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 SPZ1Q9BXG8 430 aa8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 PARVGQ9HBI0 331 aa8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 TOPORSQ9NS56 1045 aaPredicted RBP8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 PPLO60437 1756 aa8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 DLC1Q96QB1 1528 aa8.4□□□□□ -1.07
ATP2B4-201ENST00000341360 AFPP02771 609 aaKnown RBP8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 MMP1P03956 469 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 HSPA8P11142 646 aaKnown RBP8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 BRD2P25440 801 aaKnown RBP8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 SH3BGRP55822 239 aaPredicted RBP8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 ATP11AP98196 1134 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 CASC4Q6P4E1 433 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 PALM2Q8IXS6 379 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 NDUFAF2Q8N183 169 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 PPM1KQ8N3J5 372 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 ZC3H15Q8WU90 426 aaKnown RBP8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 STAG1Q8WVM7 1258 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 P2RX5Q93086 422 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 TRIM62Q9BVG3 475 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 TBC1D7Q9P0N9 293 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 SEL1LQ9UBV2 794 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 CIITAP33076 1130 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 ANKRD20A3Q5VUR7 823 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 KCTD17Q8N5Z5 321 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 CHAMP1Q96JM3 812 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 CEP170P1Q96L14 293 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 C2orf40Q9H1Z8 148 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 NLRC4Q9NPP4 1024 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 VPS18Q9P253 973 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 KIAA1024Q9UPX6 916 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 USP17L5A8MUK1 530 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 ZNF658Q5TYW1 1059 aaPredicted RBP8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 TYW1BQ6NUM6 668 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 RASEFQ8IZ41 740 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 SLC16A10Q8TF71 515 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 SYMPKQ92797 1274 aaKnown RBP8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 COA7Q96BR5 231 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 HAUS8Q9BT25 410 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 RSPH14Q9UHP6 348 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 RCOR1Q9UKL0 485 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 AKT3Q9Y243 479 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 MORC2Q9Y6X9 1032 aaPredicted RBP8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 NEXMIFQ5QGS0 1516 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 INO80B-WBP1J3KQ70 363 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 KIAA0391O15091 583 aaKnown RBP8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 SCP2P22307 547 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 XPAP23025 273 aaPredicted RBP8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 NR2F2P24468 414 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 CCNE1P24864 410 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 COPB1P53618 953 aaKnown RBP8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 BFSP1Q12934 665 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 FASTKD5Q7L8L6 764 aaKnown RBP8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 PHLDB2Q86SQ0 1253 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 SP8Q8IXZ3 490 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 CCDC170Q8IYT3 715 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 KRT12Q99456 494 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 SLF1Q9BQI6 1058 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 THAP9Q9H5L6 903 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 PCDHA7Q9UN72 937 aa8.39□□□□□ -1.07
ATP2B4-201ENST00000341360 EFCAB8A8MWE9 144 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 CYP21A2P08686 494 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 KIAA1841Q6NSI8 718 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 USP17L2Q6R6M4 530 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 RSRC2Q7L4I2 434 aaKnown RBP8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 XPO4Q9C0E2 1151 aaKnown RBP8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 PXDNLA1KZ92 1463 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 ARL4AP40617 200 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 RNASELQ05823 741 aaKnown RBP8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 LRMPQ12912 555 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 PNOCQ13519 176 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 STXBP2Q15833 593 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 TKFCQ3LXA3 575 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 PROM2Q8N271 834 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 RNF169Q8NCN4 708 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 NSUN7Q8NE18 718 aaKnown RBP8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 RBM46Q8TBY0 533 aaKnown RBP8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 PI4K2BQ8TCG2 481 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 CRAMP1Q96RY5 1269 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 TIPINQ9BVW5 301 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 BLZF1Q9H2G9 400 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 CPSF3Q9UKF6 684 aaKnown RBP8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 SRPRBQ9Y5M8 271 aaKnown RBP8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 CLRN2A0PK11 232 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 NDUFAB1O14561 156 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 ADORA1P30542 326 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 CDK8P49336 464 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 MECOMQ03112 1051 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 TBCKQ8TEA7 893 aa8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 PUS3Q9BZE2 481 aaKnown RBP8.38□□□□□ -1.07
ATP2B4-201ENST00000341360 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms