RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 SLC12A7Q9Y666 1083 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 SPDYE5A6NIY4 337 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 TEX33O43247 280 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 RANBP6O60518 1105 aaKnown RBP13.06□□□□□ -0.32
RTN3-203ENST00000341307 HSF2BPO75031 334 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 PPP1R7Q15435 360 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 RINLQ6ZS11 566 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 HDAC7Q8WUI4 952 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 CPLX3Q8WVH0 158 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 RPGRIP1Q96KN7 1286 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 RUFY1Q96T51 708 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 CNNM2Q9H8M5 875 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 WDR35Q9P2L0 1181 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 TIAM2Q8IVF5 1701 aa13.06□□□□□ -0.32
RTN3-203ENST00000341307 GPR75-ASB3A0A0A6YYF3 556 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 ZNF233A6NK53 670 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 PDLIM1O00151 329 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 SEMA3EO15041 775 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 STK38Q15208 465 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 ACBD5Q5T8D3 534 aaPredicted RBP13.05□□□□□ -0.32
RTN3-203ENST00000341307 CC2D2BQ6DHV5 1058 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 OLFM4Q6UX06 510 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 SGMS1Q86VZ5 419 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 TEKT4Q8WW24 435 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 SEC16BQ96JE7 1060 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 PPANQ9NQ55 473 aaKnown RBP13.05□□□□□ -0.32
RTN3-203ENST00000341307 TRIM10Q9UDY6 481 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 C2CD2Q9Y426 696 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 ASB3Q9Y575 518 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 USP17L12C9JPN9 530 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 USP17L21D6R901 530 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 PSMD14O00487 310 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 GHRP10912 638 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 DPEP1P16444 411 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 FECHP22830 423 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 TUBP50607 506 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 ERVK-24P63145 666 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 FMR1Q06787 632 aaKnown RBP eCLIP13.05□□□□□ -0.32
RTN3-203ENST00000341307 C2orf54Q08AI8 447 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 RASA3Q14644 834 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 NTRK3Q16288 839 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 LONRF3Q496Y0 759 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 LZTS2Q9BRK4 669 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 ALG1Q9BT22 464 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 PANK4Q9NVE7 773 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.05□□□□□ -0.324e-10■■■■□ 20.1
RTN3-203ENST00000341307 DMGDHQ9UI17 866 aaKnown RBP13.05□□□□□ -0.32
RTN3-203ENST00000341307 SAR1BQ9Y6B6 198 aa13.05□□□□□ -0.32
RTN3-203ENST00000341307 LRRC10BA6NIK2 292 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 MFAP3LO75121 409 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 CYP2D6P10635 497 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 WTAPQ15007 396 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 DIXDC1Q155Q3 683 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 DBN1Q16643 649 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 PAPD7Q5XG87 772 aaKnown RBP13.04□□□□□ -0.32
RTN3-203ENST00000341307 FOXP4Q8IVH2 680 aaPredicted RBP13.04□□□□□ -0.32
RTN3-203ENST00000341307 NFE2L3Q9Y4A8 694 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 XDHP47989 1333 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 A0A1B0GTH6 734 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 SPTLC2O15270 562 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 ALADP13716 330 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 KCNA3P22001 575 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 LIFRP42702 1097 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 GNAQP50148 359 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 CRY2Q49AN0 593 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 DZIP1Q86YF9 867 aaKnown RBP13.04□□□□□ -0.32
RTN3-203ENST00000341307 KCNG4Q8TDN1 519 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 PHACTR1Q9C0D0 580 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 KCNMB3Q9NPA1 279 aa13.04□□□□□ -0.32
RTN3-203ENST00000341307 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
RTN3-203ENST00000341307 C5orf60A6NFR6 353 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 STXBP3O00186 592 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 UFL1O94874 794 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 CLTAP09496 248 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 CMA1P23946 247 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 GUCY1A2P33402 732 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 ITGB3BPQ13352 177 aaPredicted RBP13.03□□□□□ -0.32
RTN3-203ENST00000341307 PPP4R3AQ6IN85 833 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 SLC26A6Q9BXS9 759 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 TNKSO95271 1327 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 GMNCA6NCL1 334 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 RASSF10A6NK89 507 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 N4BP3O15049 544 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 ZNF185O15231 689 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 TPD52L2O43399 206 aaKnown RBP13.03□□□□□ -0.32
RTN3-203ENST00000341307 NPTXRO95502 500 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 IARSP41252 1262 aaKnown RBP13.03□□□□□ -0.32
RTN3-203ENST00000341307 EPHB4P54760 987 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 CKAP4Q07065 602 aaKnown RBP13.03□□□□□ -0.32
RTN3-203ENST00000341307 SYCP3Q8IZU3 236 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 MED15Q96RN5 788 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 UBAC1Q9BSL1 405 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
RTN3-203ENST00000341307 DCP1AQ9NPI6 582 aaPredicted RBP13.03□□□□□ -0.32
RTN3-203ENST00000341307 MAPK8IP1Q9UQF2 711 aa13.03□□□□□ -0.32
RTN3-203ENST00000341307 NMT2O60551 498 aa13.02□□□□□ -0.32
RTN3-203ENST00000341307 LUC7L3O95232 432 aaKnown RBP13.02□□□□□ -0.32
RTN3-203ENST00000341307 YEATS4O95619 227 aa13.02□□□□□ -0.32
RTN3-203ENST00000341307 CASP14P31944 242 aa13.02□□□□□ -0.32
RTN3-203ENST00000341307 PBX1P40424 430 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms