RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CYP3A7P24462 503 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 RGS2P41220 211 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 ADCYAP1R1P41586 468 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 TAPT1Q6NXT6 567 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 SAMD3Q8N6K7 520 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 MORC4Q8TE76 937 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 MTMR9Q96QG7 549 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 KCNMB3Q9NPA1 279 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 POLR3EQ9NVU0 708 aa18.73■□□□□ 0.59
SHOX-201ENST00000334060 TXKP42681 527 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 PPP4R3AQ6IN85 833 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 MAMDC4Q6UXC1 1216 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 JADE2Q9NQC1 790 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 ADD3Q9UEY8 706 aaKnown RBP18.72■□□□□ 0.59
SHOX-201ENST00000334060 FBXO2Q9UK22 296 aaPredicted RBP18.72■□□□□ 0.59
SHOX-201ENST00000334060 POTEMA6NI47 508 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 TRAPPC10P48553 1259 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 KRT85P78386 507 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 ATP2C1P98194 919 aaPredicted RBP18.72■□□□□ 0.59
SHOX-201ENST00000334060 SP4Q02446 784 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 MTMR1Q13613 665 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 KIF22Q14807 665 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 SLC39A14Q15043 492 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 STXBP2Q15833 593 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 SOCS4Q8WXH5 440 aa18.72■□□□□ 0.59
SHOX-201ENST00000334060 ZHX1Q9UKY1 873 aaPredicted RBP18.72■□□□□ 0.59
SHOX-201ENST00000334060 DHX15O43143 795 aaKnown RBP18.71■□□□□ 0.59
SHOX-201ENST00000334060 STK38Q15208 465 aa18.71■□□□□ 0.59
SHOX-201ENST00000334060 CALCRLQ16602 461 aa18.71■□□□□ 0.59
SHOX-201ENST00000334060 Q4G0T1 1027 aa18.71■□□□□ 0.59
SHOX-201ENST00000334060 SH3TC2Q8TF17 1288 aa18.71■□□□□ 0.59
SHOX-201ENST00000334060 AGO4Q9HCK5 861 aaKnown RBP18.71■□□□□ 0.59
SHOX-201ENST00000334060 PCDHA7Q9UN72 937 aa18.71■□□□□ 0.59
SHOX-201ENST00000334060 A0A087WWV3 80 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 VWA3AA6NCI4 1184 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 ERO1AQ96HE7 468 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 SPATA32Q96LK8 384 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 ZNF396Q96N95 335 aaPredicted RBP18.7■□□□□ 0.58
SHOX-201ENST00000334060 IWS1Q96ST2 819 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 RCOR1Q9UKL0 485 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 EML1O00423 815 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 SPTLC2O15270 562 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 CHMP2AO43633 222 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 OR52Z1P0C646 297 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 ZNF865P0CJ78 1059 aaPredicted RBP18.7■□□□□ 0.58
SHOX-201ENST00000334060 KCNA2P16389 499 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 UBA1P22314 1058 aaKnown RBP18.7■□□□□ 0.58
SHOX-201ENST00000334060 TECP42680 631 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 SPIRE1Q08AE8 756 aa18.7■□□□□ 0.58
SHOX-201ENST00000334060 AXDND1Q5T1B0 1012 aaPredicted RBP18.7■□□□□ 0.58
SHOX-201ENST00000334060 EIF3JO75822 258 aaKnown RBP18.69■□□□□ 0.58
SHOX-201ENST00000334060 CCNE2O96020 404 aa18.69■□□□□ 0.58
SHOX-201ENST00000334060 CCND3P30281 292 aaPredicted RBP18.69■□□□□ 0.58
SHOX-201ENST00000334060 CACNB2Q08289 660 aaPredicted RBP18.69■□□□□ 0.58
SHOX-201ENST00000334060 OLFML2BQ68BL8 750 aa18.69■□□□□ 0.58
SHOX-201ENST00000334060 LRRC15Q8TF66 581 aa18.69■□□□□ 0.58
SHOX-201ENST00000334060 ZNF577Q9BSK1 485 aa18.69■□□□□ 0.58
SHOX-201ENST00000334060 CSRNP2Q9H175 543 aa18.69■□□□□ 0.58
SHOX-201ENST00000334060 EHMT1Q9H9B1 1298 aa18.69■□□□□ 0.58
SHOX-201ENST00000334060 VAV3Q9UKW4 847 aa18.69■□□□□ 0.58
SHOX-201ENST00000334060 DIS3Q9Y2L1 958 aaKnown RBP18.69■□□□□ 0.58
SHOX-201ENST00000334060 SPATA31C2B4DYI2 1134 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 ADCY3O60266 1144 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 PRPF40AO75400 957 aaKnown RBP18.68■□□□□ 0.58
SHOX-201ENST00000334060 PDIA4P13667 645 aaKnown RBP18.68■□□□□ 0.58
SHOX-201ENST00000334060 ACVR2BQ13705 512 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 ZNF467Q7Z7K2 595 aaPredicted RBP18.68■□□□□ 0.58
SHOX-201ENST00000334060 EPSTI1Q96J88 318 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 GOLPH3LQ9H4A5 285 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 ASB14A6NK59 587 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 IPO5O00410 1097 aaKnown RBP18.68■□□□□ 0.58
SHOX-201ENST00000334060 SMPD1P17405 629 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 CCDC144BQ3MJ40 725 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 CCDC62Q6P9F0 684 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 SHC4Q6S5L8 630 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 MOXD1Q6UVY6 613 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 CLEC17AQ6ZS10 378 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 PPP1R13LQ8WUF5 828 aa18.68■□□□□ 0.58
SHOX-201ENST00000334060 TTC12Q9H892 705 aaPredicted RBP18.68■□□□□ 0.58
SHOX-201ENST00000334060 A0A087X0B3 334 aa18.67■□□□□ 0.58
SHOX-201ENST00000334060 PSMD10O75832 226 aa18.67■□□□□ 0.58
SHOX-201ENST00000334060 YEATS4O95619 227 aa18.67■□□□□ 0.58
SHOX-201ENST00000334060 MCTP2Q6DN12 878 aa18.67■□□□□ 0.58
SHOX-201ENST00000334060 CYFIP1Q7L576 1253 aa18.67■□□□□ 0.58
SHOX-201ENST00000334060 RAET1EQ8TD07 263 aa18.67■□□□□ 0.58
SHOX-201ENST00000334060 SLC5A5Q92911 643 aa18.67■□□□□ 0.58
SHOX-201ENST00000334060 UNC45AQ9H3U1 944 aa18.67■□□□□ 0.58
SHOX-201ENST00000334060 DDX41Q9UJV9 622 aaKnown RBP18.67■□□□□ 0.58
SHOX-201ENST00000334060 ATP6V1DQ9Y5K8 247 aa18.67■□□□□ 0.58
SHOX-201ENST00000334060 XRCC5P13010 732 aaKnown RBP18.66■□□□□ 0.58
SHOX-201ENST00000334060 GCFC2P16383 781 aaKnown RBP18.66■□□□□ 0.58
SHOX-201ENST00000334060 ME1P48163 572 aa18.66■□□□□ 0.58
SHOX-201ENST00000334060 ECM1Q16610 540 aa18.66■□□□□ 0.58
SHOX-201ENST00000334060 GLIPR1L2Q4G1C9 344 aa18.66■□□□□ 0.58
SHOX-201ENST00000334060 PLIN2Q99541 437 aa18.66■□□□□ 0.58
SHOX-201ENST00000334060 SYNGAP1Q96PV0 1343 aa18.66■□□□□ 0.58
SHOX-201ENST00000334060 CYBAP13498 195 aa18.66■□□□□ 0.58
SHOX-201ENST00000334060 PRKAR2AP13861 404 aaKnown RBP18.66■□□□□ 0.58
SHOX-201ENST00000334060 LRCH2Q5VUJ6 765 aa18.66■□□□□ 0.58
SHOX-201ENST00000334060 GPRASP2Q96D09 838 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms