RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 IFFO1Q0D2I5 559 aa9.61□□□□□ -0.87
LIMK2-201ENST00000331728 ITPK1Q13572 414 aa9.61□□□□□ -0.87
LIMK2-201ENST00000331728 CLEC4GQ6UXB4 293 aa9.61□□□□□ -0.87
LIMK2-201ENST00000331728 TMC4Q7Z404 712 aa9.61□□□□□ -0.87
LIMK2-201ENST00000331728 RBM12Q9NTZ6 932 aaKnown RBP9.61□□□□□ -0.87
LIMK2-201ENST00000331728 MYMKA6NI61 221 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 KCNK3O14649 394 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 CETN3O15182 167 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 PALMO75781 387 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 PLCG2P16885 1265 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 NT5C2P49902 561 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 IKQ13123 557 aaPredicted RBP9.6□□□□□ -0.87
LIMK2-201ENST00000331728 PICALMQ13492 652 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 PTPROQ16827 1216 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 GLE1Q53GS7 698 aaKnown RBP9.6□□□□□ -0.87
LIMK2-201ENST00000331728 C3orf67Q6ZVT6 689 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 CNPY4Q8N129 248 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 DDX12PQ92771 950 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 MS4A14Q96JA4 679 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 CABS1Q96KC9 395 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 TTYH3Q9C0H2 523 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 SEPT11Q9NVA2 429 aaKnown RBP9.6□□□□□ -0.87
LIMK2-201ENST00000331728 PANK4Q9NVE7 773 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 TMEM260Q9NX78 707 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 ADAMTSL3P82987 1691 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 SERPING1P05155 500 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 PRLRP16471 622 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 TTMPQ5BVD1 217 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 SLF2Q8IX21 1173 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 SH2D3CQ8N5H7 860 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 TSEN2Q8NCE0 465 aaKnown RBP9.6□□□□□ -0.87
LIMK2-201ENST00000331728 COA7Q96BR5 231 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 SEMA6BQ9H3T3 888 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 GOLGA6L7A0A1B0GV03 622 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 G3V3G9 751 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 BTDP43251 543 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 KCNQ4P56696 695 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 PRPF4BQ13523 1007 aaKnown RBP9.6□□□□□ -0.87
LIMK2-201ENST00000331728 DCAF8Q5TAQ9 597 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 TMED8Q6PL24 325 aaPredicted RBP9.6□□□□□ -0.87
LIMK2-201ENST00000331728 RNF10Q8N5U6 811 aaKnown RBP9.6□□□□□ -0.87
LIMK2-201ENST00000331728 KIAA0895Q8NCT3 520 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 UBLCP1Q8WVY7 318 aaPredicted RBP9.6□□□□□ -0.87
LIMK2-201ENST00000331728 CAVIN3Q969G5 261 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 SPZ1Q9BXG8 430 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 IL17RBQ9NRM6 502 aa9.6□□□□□ -0.87
LIMK2-201ENST00000331728 ATXN2Q99700 1313 aaKnown RBP9.59□□□□□ -0.87
LIMK2-201ENST00000331728 GNA14O95837 355 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 NR1D1P20393 614 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 DCAF17Q5H9S7 520 aaPredicted RBP9.59□□□□□ -0.87
LIMK2-201ENST00000331728 HAUS3Q68CZ6 603 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 ZNF572Q7Z3I7 529 aaPredicted RBP9.59□□□□□ -0.87
LIMK2-201ENST00000331728 LRRC47Q8N1G4 583 aaKnown RBP9.59□□□□□ -0.87
LIMK2-201ENST00000331728 LRRC45Q96CN5 670 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 ZMYND12Q9H0C1 365 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 POLD4Q9HCU8 107 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 CEP72Q9P209 647 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 MYH10P35580 1976 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 E7EVH7 732 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 GCOM1H8Y6P7 765 aaPredicted RBP9.59□□□□□ -0.87
LIMK2-201ENST00000331728 MEFVO15553 781 aaPredicted RBP9.59□□□□□ -0.87
LIMK2-201ENST00000331728 MYZAPP0CAP1 466 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 CDK8P49336 464 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 MRPL12P52815 198 aaKnown RBP9.59□□□□□ -0.87
LIMK2-201ENST00000331728 MIIPQ5JXC2 388 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 FAM83BQ5T0W9 1011 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 CENPPQ6IPU0 288 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 KCNV1Q6PIU1 500 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 GPBP1Q86WP2 473 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 FAM133AQ8N9E0 248 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 PRPF38AQ8NAV1 312 aaKnown RBP9.59□□□□□ -0.87
LIMK2-201ENST00000331728 RAD54LQ92698 747 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 ZIM3Q96PE6 472 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 ADAMTS1Q9UHI8 967 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 SSU72P8A0A1W2PR75 194 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 TDP2O95551 362 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 CACNB1Q02641 598 aaPredicted RBP9.59□□□□□ -0.87
LIMK2-201ENST00000331728 PSMD2Q13200 908 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 CCDC121Q6ZUS5 278 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 RPGRQ92834 1020 aaKnown RBP9.59□□□□□ -0.87
LIMK2-201ENST00000331728 EDEM3Q9BZQ6 932 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 CXorf56Q9H5V9 222 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 PPANQ9NQ55 473 aaKnown RBP9.59□□□□□ -0.87
LIMK2-201ENST00000331728 PACSIN2Q9UNF0 486 aaPredicted RBP9.59□□□□□ -0.87
LIMK2-201ENST00000331728 DUOX1Q9NRD9 1551 aa9.59□□□□□ -0.87
LIMK2-201ENST00000331728 MYH3P11055 1940 aa9.58□□□□□ -0.88
LIMK2-201ENST00000331728 GNPATO15228 680 aa9.58□□□□□ -0.88
LIMK2-201ENST00000331728 CYTH3O43739 400 aa9.58□□□□□ -0.88
LIMK2-201ENST00000331728 KRT14P02533 472 aa9.58□□□□□ -0.88
LIMK2-201ENST00000331728 TNFRSF8P28908 595 aa9.58□□□□□ -0.88
LIMK2-201ENST00000331728 CARSP49589 748 aaKnown RBP9.58□□□□□ -0.88
LIMK2-201ENST00000331728 NT5C3AQ9H0P0 336 aa9.58□□□□□ -0.88
LIMK2-201ENST00000331728 GOPCQ9HD26 462 aa9.58□□□□□ -0.88
LIMK2-201ENST00000331728 DDX25Q9UHL0 483 aaKnown RBP9.58□□□□□ -0.88
LIMK2-201ENST00000331728 PALM3A6NDB9 673 aaPredicted RBP9.58□□□□□ -0.88
LIMK2-201ENST00000331728 ZNF263O14978 683 aa9.58□□□□□ -0.88
LIMK2-201ENST00000331728 EPHB6O15197 1021 aa9.58□□□□□ -0.88
LIMK2-201ENST00000331728 PPP1R12BO60237 982 aaPredicted RBP9.58□□□□□ -0.88
LIMK2-201ENST00000331728 ATP2C2O75185 946 aa9.58□□□□□ -0.88
LIMK2-201ENST00000331728 CTNNA1P35221 906 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms