RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 CCNYQ8ND76 341 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 LARP4BQ92615 738 aaKnown RBP16.73■□□□□ 0.27
PTPN21-201ENST00000328736 PGBD1Q96JS3 809 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 INO80BQ9C086 356 aaPredicted RBP16.73■□□□□ 0.27
PTPN21-201ENST00000328736 PPP1R9AQ9ULJ8 1098 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 HOXA7P31268 230 aaPredicted RBP16.73■□□□□ 0.27
PTPN21-201ENST00000328736 CYP4A11Q02928 519 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 UBE3CQ15386 1083 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 TMTC3Q6ZXV5 915 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 PRPF38AQ8NAV1 312 aaKnown RBP16.73■□□□□ 0.27
PTPN21-201ENST00000328736 MTMR6Q9Y217 621 aa16.73■□□□□ 0.27
PTPN21-201ENST00000328736 FGAP02671 866 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 PTGDRQ13258 359 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 TRIM68Q6AZZ1 485 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 STAG1Q8WVM7 1258 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 MRPL47Q9HD33 250 aaKnown RBP16.72■□□□□ 0.27
PTPN21-201ENST00000328736 HSP90AA5PQ58FG0 334 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 RSBN1LQ6PCB5 846 aaPredicted RBP16.72■□□□□ 0.27
PTPN21-201ENST00000328736 ZNF653Q96CK0 615 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 MED4Q9NPJ6 270 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 TLK1Q9UKI8 766 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 MAP3K15Q6ZN16 1313 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 UGGT1Q9NYU2 1555 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 CD2BP2O95400 341 aaKnown RBP16.72■□□□□ 0.27
PTPN21-201ENST00000328736 NDUFAF2Q8N183 169 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 PTPN22Q9Y2R2 807 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 GCC2Q8IWJ2 1684 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 EEF1GP26641 437 aaKnown RBP16.72■□□□□ 0.27
PTPN21-201ENST00000328736 DNAAF3Q8N9W5 541 aa16.72■□□□□ 0.27
PTPN21-201ENST00000328736 DHTKD1Q96HY7 919 aaPredicted RBP16.72■□□□□ 0.27
PTPN21-201ENST00000328736 PHKA1P46020 1223 aa16.71■□□□□ 0.27
PTPN21-201ENST00000328736 LRRC4Q9HBW1 653 aa16.71■□□□□ 0.27
PTPN21-201ENST00000328736 ZSWIM6Q9HCJ5 1215 aa16.71■□□□□ 0.27
PTPN21-201ENST00000328736 KRT1P04264 644 aa16.71■□□□□ 0.27
PTPN21-201ENST00000328736 MSH2P43246 934 aa16.71■□□□□ 0.27
PTPN21-201ENST00000328736 EFHD1Q9BUP0 239 aa16.71■□□□□ 0.27
PTPN21-201ENST00000328736 JRKLQ9Y4A0 524 aa16.71■□□□□ 0.27
PTPN21-201ENST00000328736 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
PTPN21-201ENST00000328736 ABCC12Q96J65 1359 aa16.71■□□□□ 0.27
PTPN21-201ENST00000328736 ZNF589Q86UQ0 364 aaPredicted RBP16.71■□□□□ 0.27
PTPN21-201ENST00000328736 MID2Q9UJV3 735 aa16.71■□□□□ 0.27
PTPN21-201ENST00000328736 MAGOHBQ96A72 148 aaKnown RBP16.71■□□□□ 0.27
PTPN21-201ENST00000328736 ATP1A2P50993 1020 aa16.71■□□□□ 0.26
PTPN21-201ENST00000328736 FAM186BQ8IYM0 893 aa16.71■□□□□ 0.26
PTPN21-201ENST00000328736 SIX6OS1Q8N1H7 587 aa16.71■□□□□ 0.26
PTPN21-201ENST00000328736 NUDCD1Q96RS6 583 aa16.71■□□□□ 0.26
PTPN21-201ENST00000328736 LSG1Q9H089 658 aaKnown RBP16.71■□□□□ 0.26
PTPN21-201ENST00000328736 SLC13A4Q9UKG4 626 aa16.71■□□□□ 0.26
PTPN21-201ENST00000328736 NR2F2P24468 414 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 RASSF7Q02833 373 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 ARMCX2Q7L311 632 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 FAF1Q9UNN5 650 aaPredicted RBP16.7■□□□□ 0.26
PTPN21-201ENST00000328736 MX2P20592 715 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 FOXP1Q9H334 677 aaPredicted RBP16.7■□□□□ 0.26
PTPN21-201ENST00000328736 PCDHA7Q9UN72 937 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 MLH3Q9UHC1 1453 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 SESN3P58005 492 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 KRT33BQ14525 404 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 TBC1D10BQ4KMP7 808 aaPredicted RBP16.7■□□□□ 0.26
PTPN21-201ENST00000328736 RASEFQ8IZ41 740 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 UHMK1Q8TAS1 419 aaKnown RBP16.7■□□□□ 0.26
PTPN21-201ENST00000328736 TTC25Q96NG3 672 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 MRPL46Q9H2W6 279 aaKnown RBP16.7■□□□□ 0.26
PTPN21-201ENST00000328736 BTBD18B2RXH4 712 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 CIAO1O76071 339 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 ELF1P32519 619 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 EPHB1P54762 984 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 DNAJC24Q6P3W2 148 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 RNF139Q8WU17 664 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 CEP170Q5SW79 1584 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 MYOM2P54296 1465 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 PPP6R2O75170 966 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 ARPP19P56211 112 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 EHHADHQ08426 723 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 FAM182BQ5T319 152 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 DARS2Q6PI48 645 aaKnown RBP16.7■□□□□ 0.26
PTPN21-201ENST00000328736 KCTD6Q8NC69 237 aa16.7■□□□□ 0.26
PTPN21-201ENST00000328736 SGO2Q562F6 1265 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 FGD4Q96M96 766 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 TUBGCP2Q9BSJ2 902 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 OLA1Q9NTK5 396 aaKnown RBP16.69■□□□□ 0.26
PTPN21-201ENST00000328736 PSAPP07602 524 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 CIITAP33076 1130 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 GUCY2DQ02846 1103 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 ARL13BQ3SXY8 428 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 ECEL1O95672 775 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 CEP170P1Q96L14 293 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 GSDMAQ96QA5 445 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 ANTXR1Q9H6X2 564 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 SUCLA2Q9P2R7 463 aaPredicted RBP16.69■□□□□ 0.26
PTPN21-201ENST00000328736 ASAP1Q9ULH1 1129 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 FMNL1O95466 1100 aaPredicted RBP16.69■□□□□ 0.26
PTPN21-201ENST00000328736 SLC4A1P02730 911 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 SLC12A1Q13621 1099 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 USPL1Q5W0Q7 1092 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 CXorf38Q8TB03 319 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 FTOQ9C0B1 505 aaKnown RBP eCLIP16.69■□□□□ 0.26
PTPN21-201ENST00000328736 INTS9Q9NV88 658 aaKnown RBP16.69■□□□□ 0.26
PTPN21-201ENST00000328736 FANCLQ9NW38 375 aa16.69■□□□□ 0.26
PTPN21-201ENST00000328736 RNF123Q5XPI4 1314 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms