RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 NCAM1P13591 858 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 MBLAC2Q68D91 279 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 PPIL6Q8IXY8 311 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 CELF2-AS1Q8N7Q2 184 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 DACT3Q96B18 629 aaPredicted RBP2.53□□□□□ -2
CCDC144A-201ENST00000328495 BTG4Q9NY30 223 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 TIMM13Q9Y5L4 95 aaPredicted RBP2.53□□□□□ -2
CCDC144A-201ENST00000328495 HCFC2Q9Y5Z7 792 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 LAMB2P55268 1798 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 CICQ96RK0 1608 aaPredicted RBP2.53□□□□□ -2
CCDC144A-201ENST00000328495 THSD7BQ9C0I4 1608 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 U2SURPO15042 1029 aaKnown RBP2.53□□□□□ -2
CCDC144A-201ENST00000328495 KLF4O43474 513 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 FBLN1P23142 703 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 IGFBP6P24592 240 aaPredicted RBP2.53□□□□□ -2
CCDC144A-201ENST00000328495 LTBRP36941 435 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 GFRA1P56159 465 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 TMEFF1Q8IYR6 380 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 PANK1Q8TE04 598 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 SGSM3Q96HU1 749 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 PWWP2AQ96N64 755 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 FBLN5Q9UBX5 448 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 ARHGEF28Q8N1W1 1705 aaKnown RBP2.53□□□□□ -2
CCDC144A-201ENST00000328495 LRP6O75581 1613 aa2.53□□□□□ -2.01
CCDC144A-201ENST00000328495 NTRK1P04629 796 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 LIMS1P48059 325 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 PPP2R2AP63151 447 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 RAB33AQ14088 237 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 TESK1Q15569 626 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 INF2Q27J81 1249 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 MROH9Q5TGP6 573 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 LURAP1LQ8IV03 231 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 TEX2Q8IWB9 1127 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 ST13P5Q8NFI4 369 aaPredicted RBP2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 KCTD13Q8WZ19 329 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 TANGO6Q9C0B7 1094 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 RXFP1Q9HBX9 757 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 PPP1R1BQ9UD71 204 aaPredicted RBP2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 RAPGEFL1Q9UHV5 662 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 COA3Q9Y2R0 106 aaPredicted RBP2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 PMF1-BGLAPU3KQ54 211 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 PEG3Q9GZU2 1588 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 RGPD3A6NKT7 1758 aaPredicted RBP2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 RGPD4Q7Z3J3 1758 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 C22orf46C9J442 243 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 PPP1R11O60927 126 aaPredicted RBP2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 ASGR2P07307 311 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 INHBBP09529 407 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 PMLP29590 882 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 CAP1Q01518 475 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 CYP4F3Q08477 520 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 MAP4K2Q12851 820 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 HSP90AA2PQ14568 343 aaPredicted RBP2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 SP8Q8IXZ3 490 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 TMEM145Q8NBT3 493 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 PLEKHO2Q8TD55 490 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 SEC14L1Q92503 715 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 DPF3Q92784 378 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 C8orf37Q96NL8 207 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 ZCCHC4Q9H5U6 513 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 EPB41L4AQ9HCS5 686 aaPredicted RBP2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 ABCA3Q99758 1704 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 SASH1O94885 1247 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 BMP7P18075 431 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 ATP2B1P20020 1258 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 SLC6A11P48066 632 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 PRSS53Q2L4Q9 553 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 B3GNT8Q7Z7M8 397 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 RIOX2Q8IUF8 465 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 Q8N1Y9 231 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 KREMEN2Q8NCW0 462 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 CPA5Q8WXQ8 436 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 TRMT2BQ96GJ1 504 aaKnown RBP2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 TMEM169Q96HH4 297 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 AARSD1Q9BTE6 412 aaKnown RBP2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 PHLDB1Q86UU1 1377 aa2.52□□□□□ -2.01
CCDC144A-201ENST00000328495 BLMP54132 1417 aaPredicted RBP2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 MST1RQ04912 1400 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 KRTAP4-8A0A0G2JLE6 195 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 A0A1W2PQU0 124 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 FPR2P25090 351 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 FOXO4P98177 505 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 SF1Q15637 639 aaKnown RBP2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 CHRNA2Q15822 529 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 NBPF6Q5VWK0 638 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 TTLL10Q6ZVT0 673 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 CEP68Q76N32 757 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 CCDC103Q8IW40 242 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 LRRC47Q8N1G4 583 aaKnown RBP2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 CHAMP1Q96JM3 812 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 NBPF4Q96M43 638 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 IER2Q9BTL4 223 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 PCDH18Q9HCL0 1135 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 PARD6AQ9NPB6 346 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 TMEFF2Q9UIK5 374 aaPredicted RBP2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 H7BY64 318 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 ATF2P15336 505 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 BCL6P41182 706 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 LSAMPQ13449 338 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 SLC35F1Q5T1Q4 408 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms